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Distribution and evolution of multiple-step phosphorelay in prokaryotes: lateral domain recruitment involved in the formation of hybrid-type histidine kinases.
Zhang W, Shi L. Zhang W, et al. Microbiology (Reading). 2005 Jul;151(Pt 7):2159-2173. doi: 10.1099/mic.0.27987-0. Microbiology (Reading). 2005. PMID: 16000707
Microbial dynamics in upflow anaerobic sludge blanket (UASB) bioreactor granules in response to short-term changes in substrate feed.
Kovacik WP, Scholten JCM, Culley D, Hickey R, Zhang W, Brockman FJ. Kovacik WP, et al. Among authors: zhang w. Microbiology (Reading). 2010 Aug;156(Pt 8):2418-2427. doi: 10.1099/mic.0.036715-0. Epub 2010 Apr 29. Microbiology (Reading). 2010. PMID: 20430810
Global transcriptomics analysis of the Desulfovibrio vulgaris change from syntrophic growth with Methanosarcina barkeri to sulfidogenic metabolism.
Plugge CM, Scholten JCM, Culley DE, Nie L, Brockman FJ, Zhang W. Plugge CM, et al. Among authors: zhang w. Microbiology (Reading). 2010 Sep;156(Pt 9):2746-2756. doi: 10.1099/mic.0.038539-0. Epub 2010 Jun 24. Microbiology (Reading). 2010. PMID: 20576691
Comparative transcriptome analysis of Desulfovibrio vulgaris grown in planktonic culture and mature biofilm on a steel surface.
Zhang W, Culley DE, Nie L, Scholten JC. Zhang W, et al. Appl Microbiol Biotechnol. 2007 Aug;76(2):447-57. doi: 10.1007/s00253-007-1014-9. Epub 2007 Jun 15. Appl Microbiol Biotechnol. 2007. PMID: 17571259
Development and assessment of whole-genome oligonucleotide microarrays to analyze an anaerobic microbial community and its responses to oxidative stress.
Scholten JC, Culley DE, Nie L, Munn KJ, Chow L, Brockman FJ, Zhang W. Scholten JC, et al. Among authors: zhang w. Biochem Biophys Res Commun. 2007 Jun 29;358(2):571-7. doi: 10.1016/j.bbrc.2007.04.160. Epub 2007 May 4. Biochem Biophys Res Commun. 2007. PMID: 17498652
LC-MS/MS based proteomic analysis and functional inference of hypothetical proteins in Desulfovibrio vulgaris.
Zhang W, Culley DE, Gritsenko MA, Moore RJ, Nie L, Scholten JC, Petritis K, Strittmatter EF, Camp DG 2nd, Smith RD, Brockman FJ. Zhang W, et al. Biochem Biophys Res Commun. 2006 Nov 3;349(4):1412-9. doi: 10.1016/j.bbrc.2006.09.019. Epub 2006 Sep 15. Biochem Biophys Res Commun. 2006. PMID: 16982031
While our previous study provided a proteomic overview of the cellular metabolism based on proteins with known functions [W. Zhang, M.A. Gritsenko, R.J. Moore, D.E. Culley, L. Nie, K. Petritis, E.F. Strittmatter, D.G. Camp II, R.D. Smith, F.J. Brockman, A proteomic …
While our previous study provided a proteomic overview of the cellular metabolism based on proteins with known functions [W. Zhang
A proteomic view of Desulfovibrio vulgaris metabolism as determined by liquid chromatography coupled with tandem mass spectrometry.
Zhang W, Gritsenko MA, Moore RJ, Culley DE, Nie L, Petritis K, Strittmatter EF, Camp DG 2nd, Smith RD, Brockman FJ. Zhang W, et al. Proteomics. 2006 Aug;6(15):4286-99. doi: 10.1002/pmic.200500930. Proteomics. 2006. PMID: 16819729
Global transcriptomic analysis of Desulfovibrio vulgaris on different electron donors.
Zhang W, Culley DE, Scholten JC, Hogan M, Vitiritti L, Brockman FJ. Zhang W, et al. Antonie Van Leeuwenhoek. 2006 Feb;89(2):221-37. doi: 10.1007/s10482-005-9024-z. Epub 2006 May 5. Antonie Van Leeuwenhoek. 2006. PMID: 16710634
Oxidative stress and heat-shock responses in Desulfovibrio vulgaris by genome-wide transcriptomic analysis.
Zhang W, Culley DE, Hogan M, Vitiritti L, Brockman FJ. Zhang W, et al. Antonie Van Leeuwenhoek. 2006 Jul;90(1):41-55. doi: 10.1007/s10482-006-9059-9. Epub 2006 May 6. Antonie Van Leeuwenhoek. 2006. PMID: 16680520
Optimization of RNA isolation from the archaebacterium Methanosarcina barkeri and validation for oligonucleotide microarray analysis.
Culley DE, Kovacik WP Jr, Brockman FJ, Zhang W. Culley DE, et al. Among authors: zhang w. J Microbiol Methods. 2006 Oct;67(1):36-43. doi: 10.1016/j.mimet.2006.02.014. Epub 2006 May 2. J Microbiol Methods. 2006. PMID: 16631263
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