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Mudskipper genomes provide insights into the terrestrial adaptation of amphibious fishes.
You X, Bian C, Zan Q, Xu X, Liu X, Chen J, Wang J, Qiu Y, Li W, Zhang X, Sun Y, Chen S, Hong W, Li Y, Cheng S, Fan G, Shi C, Liang J, Tom Tang Y, Yang C, Ruan Z, Bai J, Peng C, Mu Q, Lu J, Fan M, Yang S, Huang Z, Jiang X, Fang X, Zhang G, Zhang Y, Polgar G, Yu H, Li J, Liu Z, Zhang G, Ravi V, Coon SL, Wang J, Yang H, Venkatesh B, Wang J, Shi Q. You X, et al. Among authors: zhang g, zhang x, zhang y. Nat Commun. 2014 Dec 2;5:5594. doi: 10.1038/ncomms6594. Nat Commun. 2014. PMID: 25463417 Free PMC article.
Genome sequencing of the perciform fish Larimichthys crocea provides insights into molecular and genetic mechanisms of stress adaptation.
Ao J, Mu Y, Xiang LX, Fan D, Feng M, Zhang S, Shi Q, Zhu LY, Li T, Ding Y, Nie L, Li Q, Dong WR, Jiang L, Sun B, Zhang X, Li M, Zhang HQ, Xie S, Zhu Y, Jiang X, Wang X, Mu P, Chen W, Yue Z, Wang Z, Wang J, Shao JZ, Chen X. Ao J, et al. Among authors: zhang s, zhang hq, zhang x. PLoS Genet. 2015 Apr 2;11(4):e1005118. doi: 10.1371/journal.pgen.1005118. eCollection 2015 Apr. PLoS Genet. 2015. PMID: 25835551 Free PMC article.
The Sinocyclocheilus cavefish genome provides insights into cave adaptation.
Yang J, Chen X, Bai J, Fang D, Qiu Y, Jiang W, Yuan H, Bian C, Lu J, He S, Pan X, Zhang Y, Wang X, You X, Wang Y, Sun Y, Mao D, Liu Y, Fan G, Zhang H, Chen X, Zhang X, Zheng L, Wang J, Cheng L, Chen J, Ruan Z, Li J, Yu H, Peng C, Ma X, Xu J, He Y, Xu Z, Xu P, Wang J, Yang H, Wang J, Whitten T, Xu X, Shi Q. Yang J, et al. Among authors: zhang h, zhang x, zhang y. BMC Biol. 2016 Jan 4;14:1. doi: 10.1186/s12915-015-0223-4. BMC Biol. 2016. PMID: 26728391 Free PMC article.
High-throughput identification of novel conotoxins from the Chinese tubular cone snail (Conus betulinus) by multi-transcriptome sequencing.
Peng C, Yao G, Gao BM, Fan CX, Bian C, Wang J, Cao Y, Wen B, Zhu Y, Ruan Z, Zhao X, You X, Bai J, Li J, Lin Z, Zou S, Zhang X, Qiu Y, Chen J, Coon SL, Yang J, Chen JS, Shi Q. Peng C, et al. Among authors: zhang x. Gigascience. 2016 Apr 14;5:17. doi: 10.1186/s13742-016-0122-9. eCollection 2016. Gigascience. 2016. PMID: 27087938 Free PMC article.
Fish-T1K (Transcriptomes of 1,000 Fishes) Project: large-scale transcriptome data for fish evolution studies.
Sun Y, Huang Y, Li X, Baldwin CC, Zhou Z, Yan Z, Crandall KA, Zhang Y, Zhao X, Wang M, Wong A, Fang C, Zhang X, Huang H, Lopez JV, Kilfoyle K, Zhang Y, Ortí G, Venkatesh B, Shi Q. Sun Y, et al. Among authors: zhang x, zhang y. Gigascience. 2016 May 3;5:18. doi: 10.1186/s13742-016-0124-7. eCollection 2016. Gigascience. 2016. PMID: 27144000 Free PMC article.
A chromosome-level genome assembly of the Asian arowana, Scleropages formosus.
Li J, Bian C, Hu Y, Mu X, Shen X, Ravi V, Kuznetsova IS, Sun Y, You X, Qiu Y, Zhang X, Yu H, Huang Y, Xu P, Gu R, Xu J, Orbán L, Venkatesh B, Shi Q. Li J, et al. Among authors: zhang x. Sci Data. 2016 Dec 6;3:160105. doi: 10.1038/sdata.2016.105. Sci Data. 2016. PMID: 27922628 Free PMC article.
The seahorse genome and the evolution of its specialized morphology.
Lin Q, Fan S, Zhang Y, Xu M, Zhang H, Yang Y, Lee AP, Woltering JM, Ravi V, Gunter HM, Luo W, Gao Z, Lim ZW, Qin G, Schneider RF, Wang X, Xiong P, Li G, Wang K, Min J, Zhang C, Qiu Y, Bai J, He W, Bian C, Zhang X, Shan D, Qu H, Sun Y, Gao Q, Huang L, Shi Q, Meyer A, Venkatesh B. Lin Q, et al. Among authors: zhang c, zhang h, zhang x, zhang y. Nature. 2016 Dec 14;540(7633):395-399. doi: 10.1038/nature20595. Nature. 2016. PMID: 27974754 Free PMC article.
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