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62,244 results
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Signal peptide prediction based on analysis of experimentally verified cleavage sites.
Zhang Z, Henzel WJ. Zhang Z, et al. Protein Sci. 2004 Oct;13(10):2819-24. doi: 10.1110/ps.04682504. Epub 2004 Aug 31. Protein Sci. 2004. PMID: 15340161 Free PMC article.
Human De-etiolated-1 regulates c-Jun by assembling a CUL4A ubiquitin ligase.
Wertz IE, O'Rourke KM, Zhang Z, Dornan D, Arnott D, Deshaies RJ, Dixit VM. Wertz IE, et al. Among authors: zhang z. Science. 2004 Feb 27;303(5662):1371-4. doi: 10.1126/science.1093549. Epub 2004 Jan 22. Science. 2004. PMID: 14739464
CanPredict: a computational tool for predicting cancer-associated missense mutations.
Kaminker JS, Zhang Y, Watanabe C, Zhang Z. Kaminker JS, et al. Among authors: zhang y, zhang z. Nucleic Acids Res. 2007 Jul;35(Web Server issue):W595-8. doi: 10.1093/nar/gkm405. Epub 2007 May 30. Nucleic Acids Res. 2007. PMID: 17537827 Free PMC article.
Distinguishing cancer-associated missense mutations from common polymorphisms.
Kaminker JS, Zhang Y, Waugh A, Haverty PM, Peters B, Sebisanovic D, Stinson J, Forrest WF, Bazan JF, Seshagiri S, Zhang Z. Kaminker JS, et al. Among authors: zhang y, zhang z. Cancer Res. 2007 Jan 15;67(2):465-73. doi: 10.1158/0008-5472.CAN-06-1736. Cancer Res. 2007. PMID: 17234753
Bioinformatics and cancer target discovery.
Desany B, Zhang Z. Desany B, et al. Among authors: zhang z. Drug Discov Today. 2004 Sep 15;9(18):795-802. doi: 10.1016/S1359-6446(04)03224-6. Drug Discov Today. 2004. PMID: 15364067 Review.
Bi-directional SIFT predicts a subset of activating mutations.
Lee W, Zhang Y, Mukhyala K, Lazarus RA, Zhang Z. Lee W, et al. Among authors: zhang y, zhang z. PLoS One. 2009 Dec 14;4(12):e8311. doi: 10.1371/journal.pone.0008311. PLoS One. 2009. PMID: 20011534 Free PMC article.
Natural selection of protein structural and functional properties: a single nucleotide polymorphism perspective.
Liu J, Zhang Y, Lei X, Zhang Z. Liu J, et al. Among authors: zhang y, zhang z. Genome Biol. 2008 Apr 8;9(4):R69. doi: 10.1186/gb-2008-9-4-r69. Genome Biol. 2008. PMID: 18397526 Free PMC article.
Computational prediction of the functional effects of amino acid substitutions in signal peptides using a model-based approach.
Hon LS, Zhang Y, Kaminker JS, Zhang Z. Hon LS, et al. Among authors: zhang y, zhang z. Hum Mutat. 2009 Jan;30(1):99-106. doi: 10.1002/humu.20798. Hum Mutat. 2009. PMID: 18570327
The secreted protein discovery initiative (SPDI), a large-scale effort to identify novel human secreted and transmembrane proteins: a bioinformatics assessment.
Clark HF, Gurney AL, Abaya E, Baker K, Baldwin D, Brush J, Chen J, Chow B, Chui C, Crowley C, Currell B, Deuel B, Dowd P, Eaton D, Foster J, Grimaldi C, Gu Q, Hass PE, Heldens S, Huang A, Kim HS, Klimowski L, Jin Y, Johnson S, Lee J, Lewis L, Liao D, Mark M, Robbie E, Sanchez C, Schoenfeld J, Seshagiri S, Simmons L, Singh J, Smith V, Stinson J, Vagts A, Vandlen R, Watanabe C, Wieand D, Woods K, Xie MH, Yansura D, Yi S, Yu G, Yuan J, Zhang M, Zhang Z, Goddard A, Wood WI, Godowski P, Gray A. Clark HF, et al. Among authors: zhang m, zhang z. Genome Res. 2003 Oct;13(10):2265-70. doi: 10.1101/gr.1293003. Epub 2003 Sep 15. Genome Res. 2003. PMID: 12975309 Free PMC article.
A profile hidden Markov model for signal peptides generated by HMMER.
Zhang Z, Wood WI. Zhang Z, et al. Bioinformatics. 2003 Jan 22;19(2):307-8. doi: 10.1093/bioinformatics/19.2.307. Bioinformatics. 2003. PMID: 12538263
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