Zhang Z - Search Results

1

RIPSeeker: a statistical package for identifying protein-associated transcripts from RIP-seq experiments.

Li Y, Zhao DY, Greenblatt JF, Zhang Z. Li Y, et al. Among authors: zhang z. Nucleic Acids Res. 2013 Apr;41(8):e94. doi: 10.1093/nar/gkt142. Epub 2013 Feb 28. Nucleic Acids Res. 2013. PMID: 23455476 Free PMC article.

2

An atlas of chaperone-protein interactions in Saccharomyces cerevisiae: implications to protein folding pathways in the cell.

Gong Y, Kakihara Y, Krogan N, Greenblatt J, Emili A, Zhang Z, Houry WA. Gong Y, et al. Among authors: zhang z. Mol Syst Biol. 2009;5:275. doi: 10.1038/msb.2009.26. Epub 2009 Jun 16. Mol Syst Biol. 2009. PMID: 19536198 Free PMC article.

3

The evolutionary landscape of the chromatin modification machinery reveals lineage specific gains, expansions, and losses.

On T, Xiong X, Pu S, Turinsky A, Gong Y, Emili A, Zhang Z, Greenblatt J, Wodak SJ, Parkinson J. On T, et al. Among authors: zhang z. Proteins. 2010 Jul;78(9):2075-89. doi: 10.1002/prot.22723. Proteins. 2010. PMID: 20455264

4

DAnCER: disease-annotated chromatin epigenetics resource.

Turinsky AL, Turner B, Borja RC, Gleeson JA, Heath M, Pu S, Switzer T, Dong D, Gong Y, On T, Xiong X, Emili A, Greenblatt J, Parkinson J, Zhang Z, Wodak SJ. Turinsky AL, et al. Among authors: zhang z. Nucleic Acids Res. 2011 Jan;39(Database issue):D889-94. doi: 10.1093/nar/gkq857. Epub 2010 Sep 28. Nucleic Acids Res. 2011. PMID: 20876685 Free PMC article.

5

Expanding the landscape of chromatin modification (CM)-related functional domains and genes in human.

Pu S, Turinsky AL, Vlasblom J, On T, Xiong X, Emili A, Zhang Z, Greenblatt J, Parkinson J, Wodak SJ. Pu S, et al. Among authors: zhang z. PLoS One. 2010 Nov 29;5(11):e14122. doi: 10.1371/journal.pone.0014122. PLoS One. 2010. PMID: 21124763 Free PMC article.

6

DNA motif elucidation using belief propagation.

Wong KC, Chan TM, Peng C, Li Y, Zhang Z. Wong KC, et al. Among authors: zhang z. Nucleic Acids Res. 2013 Sep;41(16):e153. doi: 10.1093/nar/gkt574. Epub 2013 Jun 29. Nucleic Acids Res. 2013. PMID: 23814189 Free PMC article.

7

Mapping the functional yeast ABC transporter interactome.

Snider J, Hanif A, Lee ME, Jin K, Yu AR, Graham C, Chuk M, Damjanovic D, Wierzbicka M, Tang P, Balderes D, Wong V, Jessulat M, Darowski KD, San Luis BJ, Shevelev I, Sturley SL, Boone C, Greenblatt JF, Zhang Z, Paumi CM, Babu M, Park HO, Michaelis S, Stagljar I. Snider J, et al. Among authors: zhang z. Nat Chem Biol. 2013 Sep;9(9):565-72. doi: 10.1038/nchembio.1293. Epub 2013 Jul 7. Nat Chem Biol. 2013. PMID: 23831759 Free PMC article.

8

A probabilistic approach to explore human miRNA targetome by integrating miRNA-overexpression data and sequence information.

Li Y, Goldenberg A, Wong KC, Zhang Z. Li Y, et al. Among authors: zhang z. Bioinformatics. 2014 Mar 1;30(5):621-8. doi: 10.1093/bioinformatics/btt599. Epub 2013 Oct 17. Bioinformatics. 2014. PMID: 24135265

9

N6-methyladenosine modification destabilizes developmental regulators in embryonic stem cells.

Wang Y, Li Y, Toth JI, Petroski MD, Zhang Z, Zhao JC. Wang Y, et al. Among authors: zhang z. Nat Cell Biol. 2014 Feb;16(2):191-8. doi: 10.1038/ncb2902. Epub 2014 Jan 7. Nat Cell Biol. 2014. PMID: 24394384 Free PMC article.

10

Inferring probabilistic miRNA-mRNA interaction signatures in cancers: a role-switch approach.

Li Y, Liang C, Wong KC, Jin K, Zhang Z. Li Y, et al. Among authors: zhang z. Nucleic Acids Res. 2014 May;42(9):e76. doi: 10.1093/nar/gku182. Epub 2014 Mar 7. Nucleic Acids Res. 2014. PMID: 24609385 Free PMC article.

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