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Using Chado to store genome annotation data.
Zhou P, Emmert D, Zhang P. Zhou P, et al. Curr Protoc Bioinformatics. 2006 Jan;Chapter 9:Unit 9.6. doi: 10.1002/0471250953.bi0906s12. Curr Protoc Bioinformatics. 2006. PMID: 18428772
Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
Matthews BB, Dos Santos G, Crosby MA, Emmert DB, St Pierre SE, Gramates LS, Zhou P, Schroeder AJ, Falls K, Strelets V, Russo SM, Gelbart WM; FlyBase Consortium. Matthews BB, et al. Among authors: zhou p. G3 (Bethesda). 2015 Jun 24;5(8):1721-36. doi: 10.1534/g3.115.018929. G3 (Bethesda). 2015. PMID: 26109357 Free PMC article.
FlyBase at 25: looking to the future.
Gramates LS, Marygold SJ, Santos GD, Urbano JM, Antonazzo G, Matthews BB, Rey AJ, Tabone CJ, Crosby MA, Emmert DB, Falls K, Goodman JL, Hu Y, Ponting L, Schroeder AJ, Strelets VB, Thurmond J, Zhou P; the FlyBase Consortium. Gramates LS, et al. Among authors: zhou p. Nucleic Acids Res. 2017 Jan 4;45(D1):D663-D671. doi: 10.1093/nar/gkw1016. Epub 2016 Oct 30. Nucleic Acids Res. 2017. PMID: 27799470 Free PMC article.
Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
Crosby MA, Gramates LS, Dos Santos G, Matthews BB, St Pierre SE, Zhou P, Schroeder AJ, Falls K, Emmert DB, Russo SM, Gelbart WM; FlyBase Consortium. Crosby MA, et al. Among authors: zhou p. G3 (Bethesda). 2015 Jun 24;5(8):1737-49. doi: 10.1534/g3.115.018937. G3 (Bethesda). 2015. PMID: 26109356 Free PMC article.
6,320 results