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Metabolic and metagenomic outcomes from early-life pulsed antibiotic treatment.
Nobel YR, Cox LM, Kirigin FF, Bokulich NA, Yamanishi S, Teitler I, Chung J, Sohn J, Barber CM, Goldfarb DS, Raju K, Abubucker S, Zhou Y, Ruiz VE, Li H, Mitreva M, Alekseyenko AV, Weinstock GM, Sodergren E, Blaser MJ. Nobel YR, et al. Among authors: zhou y. Nat Commun. 2015 Jun 30;6:7486. doi: 10.1038/ncomms8486. Nat Commun. 2015. PMID: 26123276 Free PMC article.
Enteric defensins are essential regulators of intestinal microbial ecology.
Salzman NH, Hung K, Haribhai D, Chu H, Karlsson-Sjöberg J, Amir E, Teggatz P, Barman M, Hayward M, Eastwood D, Stoel M, Zhou Y, Sodergren E, Weinstock GM, Bevins CL, Williams CB, Bos NA. Salzman NH, et al. Among authors: zhou y. Nat Immunol. 2010 Jan;11(1):76-83. doi: 10.1038/ni.1825. Epub 2009 Oct 22. Nat Immunol. 2010. PMID: 19855381 Free PMC article.
A framework for human microbiome research.
Human Microbiome Project Consortium. Human Microbiome Project Consortium. Nature. 2012 Jun 13;486(7402):215-21. doi: 10.1038/nature11209. Nature. 2012. PMID: 22699610 Free PMC article.
Novel bacterial taxa in the human microbiome.
Wylie KM, Truty RM, Sharpton TJ, Mihindukulasuriya KA, Zhou Y, Gao H, Sodergren E, Weinstock GM, Pollard KS. Wylie KM, et al. Among authors: zhou y. PLoS One. 2012;7(6):e35294. doi: 10.1371/journal.pone.0035294. Epub 2012 Jun 13. PLoS One. 2012. PMID: 22719826 Free PMC article.
Sepsis from the gut: the enteric habitat of bacteria that cause late-onset neonatal bloodstream infections.
Carl MA, Ndao IM, Springman AC, Manning SD, Johnson JR, Johnston BD, Burnham CA, Weinstock ES, Weinstock GM, Wylie TN, Mitreva M, Abubucker S, Zhou Y, Stevens HJ, Hall-Moore C, Julian S, Shaikh N, Warner BB, Tarr PI. Carl MA, et al. Among authors: zhou y. Clin Infect Dis. 2014 May;58(9):1211-8. doi: 10.1093/cid/ciu084. Epub 2014 Mar 18. Clin Infect Dis. 2014. PMID: 24647013 Free PMC article.
Exploration of bacterial community classes in major human habitats.
Zhou Y, Mihindukulasuriya KA, Gao H, La Rosa PS, Wylie KM, Martin JC, Kota K, Shannon WD, Mitreva M, Sodergren E, Weinstock GM. Zhou Y, et al. Genome Biol. 2014 May 7;15(5):R66. doi: 10.1186/gb-2014-15-5-r66. Genome Biol. 2014. PMID: 24887286 Free PMC article.
Patterned progression of bacterial populations in the premature infant gut.
La Rosa PS, Warner BB, Zhou Y, Weinstock GM, Sodergren E, Hall-Moore CM, Stevens HJ, Bennett WE Jr, Shaikh N, Linneman LA, Hoffmann JA, Hamvas A, Deych E, Shands BA, Shannon WD, Tarr PI. La Rosa PS, et al. Among authors: zhou y. Proc Natl Acad Sci U S A. 2014 Aug 26;111(34):12522-7. doi: 10.1073/pnas.1409497111. Epub 2014 Aug 11. Proc Natl Acad Sci U S A. 2014. PMID: 25114261 Free PMC article.
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