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Single-cell transcriptomics identifies CD44 as a marker and regulator of endothelial to haematopoietic transition.
Oatley M, Bölükbası ÖV, Svensson V, Shvartsman M, Ganter K, Zirngibl K, Pavlovich PV, Milchevskaya V, Foteva V, Natarajan KN, Baying B, Benes V, Patil KR, Teichmann SA, Lancrin C. Oatley M, et al. Among authors: zirngibl k. Nat Commun. 2020 Jan 29;11(1):586. doi: 10.1038/s41467-019-14171-5. Nat Commun. 2020. PMID: 31996681 Free PMC article.
Bioaccumulation of therapeutic drugs by human gut bacteria.
Klünemann M, Andrejev S, Blasche S, Mateus A, Phapale P, Devendran S, Vappiani J, Simon B, Scott TA, Kafkia E, Konstantinidis D, Zirngibl K, Mastrorilli E, Banzhaf M, Mackmull MT, Hövelmann F, Nesme L, Brochado AR, Maier L, Bock T, Periwal V, Kumar M, Kim Y, Tramontano M, Schultz C, Beck M, Hennig J, Zimmermann M, Sévin DC, Cabreiro F, Savitski MM, Bork P, Typas A, Patil KR. Klünemann M, et al. Among authors: zirngibl k. Nature. 2021 Sep;597(7877):533-538. doi: 10.1038/s41586-021-03891-8. Epub 2021 Sep 8. Nature. 2021. PMID: 34497420 Free PMC article.
Metabolic memory underlying minimal residual disease in breast cancer.
Radic Shechter K, Kafkia E, Zirngibl K, Gawrzak S, Alladin A, Machado D, Lüchtenborg C, Sévin DC, Brügger B, Patil KR, Jechlinger M. Radic Shechter K, et al. Among authors: zirngibl k. Mol Syst Biol. 2021 Oct;17(10):e10141. doi: 10.15252/msb.202010141. Mol Syst Biol. 2021. PMID: 34694069 Free PMC article.
Yeast Creates a Niche for Symbiotic Lactic Acid Bacteria through Nitrogen Overflow.
Ponomarova O, Gabrielli N, Sévin DC, Mülleder M, Zirngibl K, Bulyha K, Andrejev S, Kafkia E, Typas A, Sauer U, Ralser M, Patil KR. Ponomarova O, et al. Among authors: zirngibl k. Cell Syst. 2017 Oct 25;5(4):345-357.e6. doi: 10.1016/j.cels.2017.09.002. Epub 2017 Sep 27. Cell Syst. 2017. PMID: 28964698 Free PMC article.
Network integration of thermal proteome profiling with multi-omics data decodes PARP inhibition.
Burtscher ML, Gade S, Garrido-Rodriguez M, Rutkowska A, Werner T, Eberl HC, Petretich M, Knopf N, Zirngibl K, Grandi P, Bergamini G, Bantscheff M, Fälth-Savitski M, Saez-Rodriguez J. Burtscher ML, et al. Among authors: zirngibl k. Mol Syst Biol. 2024 Apr;20(4):458-474. doi: 10.1038/s44320-024-00025-w. Epub 2024 Mar 7. Mol Syst Biol. 2024. PMID: 38454145 Free PMC article.
p53 further extends its reach.
Zirngibl K, Moll UM. Zirngibl K, et al. Oncoimmunology. 2013 May 1;2(5):e24959. doi: 10.4161/onci.24959. Oncoimmunology. 2013. PMID: 24255806 Free PMC article. No abstract available.