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Statistical analysis of membrane proteome expression changes in Saccharomyces cerevisiae.
Zybailov B, Mosley AL, Sardiu ME, Coleman MK, Florens L, Washburn MP. Zybailov B, et al. J Proteome Res. 2006 Sep;5(9):2339-47. doi: 10.1021/pr060161n. J Proteome Res. 2006. PMID: 16944946
Quantitative shotgun proteomics using a protease with broad specificity and normalized spectral abundance factors.
Zybailov BL, Florens L, Washburn MP. Zybailov BL, et al. Mol Biosyst. 2007 May;3(5):354-60. doi: 10.1039/b701483j. Epub 2007 Apr 10. Mol Biosyst. 2007. PMID: 17460794
Correlation of relative abundance ratios derived from peptide ion chromatograms and spectrum counting for quantitative proteomic analysis using stable isotope labeling.
Zybailov B, Coleman MK, Florens L, Washburn MP. Zybailov B, et al. Anal Chem. 2005 Oct 1;77(19):6218-24. doi: 10.1021/ac050846r. Anal Chem. 2005. PMID: 16194081
Principles and applications of multidimensional protein identification technology.
Paoletti AC, Zybailov B, Washburn MP. Paoletti AC, et al. Among authors: zybailov b. Expert Rev Proteomics. 2004 Oct;1(3):275-82. doi: 10.1586/14789450.1.3.275. Expert Rev Proteomics. 2004. PMID: 15966824
A mammalian mediator subunit that shares properties with Saccharomyces cerevisiae mediator subunit Cse2.
Tomomori-Sato C, Sato S, Parmely TJ, Banks CA, Sorokina I, Florens L, Zybailov B, Washburn MP, Brower CS, Conaway RC, Conaway JW. Tomomori-Sato C, et al. Among authors: zybailov b. J Biol Chem. 2004 Feb 13;279(7):5846-51. doi: 10.1074/jbc.M312523200. Epub 2003 Nov 24. J Biol Chem. 2004. PMID: 14638676
A set of consensus mammalian mediator subunits identified by multidimensional protein identification technology.
Sato S, Tomomori-Sato C, Parmely TJ, Florens L, Zybailov B, Swanson SK, Banks CA, Jin J, Cai Y, Washburn MP, Conaway JW, Conaway RC. Sato S, et al. Among authors: zybailov b. Mol Cell. 2004 Jun 4;14(5):685-91. doi: 10.1016/j.molcel.2004.05.006. Mol Cell. 2004. PMID: 15175163
Workflow for large scale detection and validation of peptide modifications by RPLC-LTQ-Orbitrap: application to the Arabidopsis thaliana leaf proteome and an online modified peptide library.
Zybailov B, Sun Q, van Wijk KJ. Zybailov B, et al. Anal Chem. 2009 Oct 1;81(19):8015-24. doi: 10.1021/ac9011792. Anal Chem. 2009. PMID: 19725545
Large scale comparative proteomics of a chloroplast Clp protease mutant reveals folding stress, altered protein homeostasis, and feedback regulation of metabolism.
Zybailov B, Friso G, Kim J, Rudella A, Rodríguez VR, Asakura Y, Sun Q, van Wijk KJ. Zybailov B, et al. Mol Cell Proteomics. 2009 Aug;8(8):1789-1810. doi: 10.1074/mcp.M900104-MCP200. Mol Cell Proteomics. 2009. PMID: 19423572 Free PMC article.
Recruitment of a foreign quinone into the A1 site of photosystem I. In vivo replacement of plastoquinone-9 by media-supplemented naphthoquinones in phylloquinone biosynthetic pathway mutants of Synechocystis sp. PCC 6803.
Johnson TW, Zybailov B, Jones AD, Bittl R, Zech S, Stehlik D, Golbeck JH, Chitnis PR. Johnson TW, et al. Among authors: zybailov b. J Biol Chem. 2001 Oct 26;276(43):39512-21. doi: 10.1074/jbc.M104040200. Epub 2001 Jul 24. J Biol Chem. 2001. PMID: 11470786
PCC 6803 results in plastoquinone-9 (PQ-9) occupying the A(1) site and functioning in electron transfer from A(0) to the FeS clusters in photosystem (PS) I (Johnson, T. W., Shen, G., Zybailov, B., Kolling, D., Reategui, R., Beauparlant, S., Vassiliev, I. ...
PCC 6803 results in plastoquinone-9 (PQ-9) occupying the A(1) site and functioning in electron transfer from A(0) to the FeS clusters in pho …
Recruitment of a foreign quinone into the A(1) site of photosystem I. II. Structural and functional characterization of phylloquinone biosynthetic pathway mutants by electron paramagnetic resonance and electron-nuclear double resonance spectroscopy.
Zybailov B, van der Est A, Zech SG, Teutloff C, Johnson TW, Shen G, Bittl R, Stehlik D, Chitnis PR, Golbeck JH. Zybailov B, et al. J Biol Chem. 2000 Mar 24;275(12):8531-9. doi: 10.1074/jbc.275.12.8531. J Biol Chem. 2000. PMID: 10722691
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