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A draft genome sequence of the elusive giant squid, Architeuthis dux.
da Fonseca RR, Couto A, Machado AM, Brejova B, Albertin CB, Silva F, Gardner P, Baril T, Hayward A, Campos A, Ribeiro ÂM, Barrio-Hernandez I, Hoving HJ, Tafur-Jimenez R, Chu C, Frazão B, Petersen B, Peñaloza F, Musacchia F, Alexander GC, Osório H, Winkelmann I, Simakov O, Rasmussen S, Rahman MZ, Pisani D, Vinther J, Jarvis E, Zhang G, Strugnell JM, Castro LFC, Fedrigo O, Patricio M, Li Q, Rocha S, Antunes A, Wu Y, Ma B, Sanges R, Vinar T, Blagoev B, Sicheritz-Ponten T, Nielsen R, Gilbert MTP. da Fonseca RR, et al. Gigascience. 2020 Jan 1;9(1):giz152. doi: 10.1093/gigascience/giz152. Gigascience. 2020. PMID: 31942620 Free PMC article.
Cephalopod genomics: A plan of strategies and organization.
Albertin CB, Bonnaud L, Brown CT, Crookes-Goodson WJ, da Fonseca RR, Di Cristo C, Dilkes BP, Edsinger-Gonzales E, Freeman RM Jr, Hanlon RT, Koenig KM, Lindgren AR, Martindale MQ, Minx P, Moroz LL, Nödl MT, Nyholm SV, Ogura A, Pungor JR, Rosenthal JJ, Schwarz EM, Shigeno S, Strugnell JM, Wollesen T, Zhang G, Ragsdale CW. Albertin CB, et al. Among authors: da fonseca rr. Stand Genomic Sci. 2012 Oct 10;7(1):175-88. doi: 10.4056/sigs.3136559. Epub 2012 Sep 26. Stand Genomic Sci. 2012. PMID: 23451296 Free PMC article.
Patterns of positive selection in six Mammalian genomes.
Kosiol C, Vinar T, da Fonseca RR, Hubisz MJ, Bustamante CD, Nielsen R, Siepel A. Kosiol C, et al. Among authors: da fonseca rr. PLoS Genet. 2008 Aug 1;4(8):e1000144. doi: 10.1371/journal.pgen.1000144. PLoS Genet. 2008. PMID: 18670650 Free PMC article.
Positive selection on apoptosis related genes.
da Fonseca RR, Kosiol C, Vinar T, Siepel A, Nielsen R. da Fonseca RR, et al. FEBS Lett. 2010 Feb 5;584(3):469-76. doi: 10.1016/j.febslet.2009.12.022. Epub 2009 Dec 22. FEBS Lett. 2010. PMID: 20026333 Free article. Review.
Positive selection on the killer whale mitogenome.
Foote AD, Morin PA, Durban JW, Pitman RL, Wade P, Willerslev E, Gilbert MT, da Fonseca RR. Foote AD, et al. Among authors: da fonseca rr. Biol Lett. 2011 Feb 23;7(1):116-8. doi: 10.1098/rsbl.2010.0638. Epub 2010 Sep 1. Biol Lett. 2011. PMID: 20810427 Free PMC article.
58 results