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Table representation of search results timeline featuring number of search results per year.

Year Number of Results
1972 1
1977 1
1978 1
1980 5
1981 2
1982 6
1983 11
1984 14
1985 23
1986 23
1987 24
1988 51
1989 71
1990 105
1991 148
1992 170
1993 202
1994 323
1995 338
1996 471
1997 631
1998 741
1999 871
2000 2166
2001 1825
2002 1975
2003 2306
2004 2735
2005 3172
2006 3568
2007 4322
2008 4647
2009 5341
2010 6245
2011 7204
2012 8913
2013 10581
2014 12285
2015 14023
2016 15274
2017 17009
2018 18657
2019 21231
2020 26862
2021 32809
2022 35796
2023 35323
2024 34885
2025 193

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292,577 results

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Page 1
Optimal database combinations for literature searches in systematic reviews: a prospective exploratory study.
Bramer WM, Rethlefsen ML, Kleijnen J, Franco OH. Bramer WM, et al. Syst Rev. 2017 Dec 6;6(1):245. doi: 10.1186/s13643-017-0644-y. Syst Rev. 2017. PMID: 29208034 Free PMC article. Review.
BACKGROUND: Within systematic reviews, when searching for relevant references, it is advisable to use multiple databases. However, searching databases is laborious and time-consuming, as syntax of search strategies are database specific. …
BACKGROUND: Within systematic reviews, when searching for relevant references, it is advisable to use multiple databases. Howe …
Efficient Indexing of Peptides for Database Search Using Tide.
Nii Adoquaye Acquaye FL, Kertesz-Farkas A, Noble WS. Nii Adoquaye Acquaye FL, et al. J Proteome Res. 2023 Feb 3;22(2):577-584. doi: 10.1021/acs.jproteome.2c00617. Epub 2023 Jan 12. J Proteome Res. 2023. PMID: 36633229
The first step in the analysis of protein tandem mass spectrometry data typically involves searching the observed spectra against a protein database. During database search, the search engine must digest the proteins in the database into …
The first step in the analysis of protein tandem mass spectrometry data typically involves searching the observed spectra against a p …
Assessment and Comparison of Database Search Engines for Peptidomic Applications.
De La Toba EA, Anapindi KDB, Sweedler JV. De La Toba EA, et al. J Proteome Res. 2023 Oct 6;22(10):3123-3134. doi: 10.1021/acs.jproteome.2c00307. Epub 2023 Feb 21. J Proteome Res. 2023. PMID: 36809008 Free PMC article.
Protein database search engines are an integral component of mass spectrometry-based peptidomic analyses. ...Finally, an assessment employing a mixed species protein database was performed to evaluate search engine precision and sensitivity when sea …
Protein database search engines are an integral component of mass spectrometry-based peptidomic analyses. ...Finally, an asses …
PICO, PICOS and SPIDER: a comparison study of specificity and sensitivity in three search tools for qualitative systematic reviews.
Methley AM, Campbell S, Chew-Graham C, McNally R, Cheraghi-Sohi S. Methley AM, et al. BMC Health Serv Res. 2014 Nov 21;14:579. doi: 10.1186/s12913-014-0579-0. BMC Health Serv Res. 2014. PMID: 25413154 Free PMC article.
Difficulties have been reported in conducting literature searches of qualitative research using the PICO search tool. An alternative search tool, entitled SPIDER, was recently developed for more effective searching of qualitative research, but remained …
Difficulties have been reported in conducting literature searches of qualitative research using the PICO search tool. An alter …
BLAST+: architecture and applications.
Camacho C, Coulouris G, Avagyan V, Ma N, Papadopoulos J, Bealer K, Madden TL. Camacho C, et al. BMC Bioinformatics. 2009 Dec 15;10:421. doi: 10.1186/1471-2105-10-421. BMC Bioinformatics. 2009. PMID: 20003500 Free PMC article.
BACKGROUND: Sequence similarity searching is a very important bioinformatics task. While Basic Local Alignment Search Tool (BLAST) outperforms exact methods through its use of heuristics, the speed of the current BLAST software is suboptimal for very long queries or …
BACKGROUND: Sequence similarity searching is a very important bioinformatics task. While Basic Local Alignment Search Tool (BL …
A systematic approach to searching: an efficient and complete method to develop literature searches.
Bramer WM, de Jonge GB, Rethlefsen ML, Mast F, Kleijnen J. Bramer WM, et al. J Med Libr Assoc. 2018 Oct;106(4):531-541. doi: 10.5195/jmla.2018.283. Epub 2018 Oct 1. J Med Libr Assoc. 2018. PMID: 30271302 Free PMC article.
Creating search strategies for systematic reviews, finding the best balance between sensitivity and specificity, and translating search strategies between databases is challenging. ...The described method can be used to create complex and comprehensive sea …
Creating search strategies for systematic reviews, finding the best balance between sensitivity and specificity, and translating s …
Database similarity searches.
Plewniak F. Plewniak F. Methods Mol Biol. 2008;484:361-78. doi: 10.1007/978-1-59745-398-1_24. Methods Mol Biol. 2008. PMID: 18592192
Such algorithms have been implemented as fast and efficient programs (Blast, FastA) available in different types to address different kinds of problems. After searching the appropriate database, similarity search programs produce a list of similar sequences a …
Such algorithms have been implemented as fast and efficient programs (Blast, FastA) available in different types to address different kinds …
ProbRank: An efficient DNA database search method for complex mixtures per a quantitative likelihood ratio model.
Hoogenboom J, Sijen T, Benschop C. Hoogenboom J, et al. Forensic Sci Int Genet. 2023 Jul;65:102884. doi: 10.1016/j.fsigen.2023.102884. Epub 2023 May 2. Forensic Sci Int Genet. 2023. PMID: 37150077
Searching a DNA Database with a DNA profile from an evidentiary trace can provide investigative leads in a forensic case. Various searching approaches exist such as conventional methods based on matching alleles or more advanced methods computing likelihood r …
Searching a DNA Database with a DNA profile from an evidentiary trace can provide investigative leads in a forensic case. Vari …
A Hybrid Spectral Library and Protein Sequence Database Search Strategy for Bottom-Up and Top-Down Proteomic Data Analysis.
Dai Y, Millikin RJ, Rolfs Z, Shortreed MR, Smith LM. Dai Y, et al. J Proteome Res. 2022 Nov 4;21(11):2609-2618. doi: 10.1021/acs.jproteome.2c00305. Epub 2022 Oct 7. J Proteome Res. 2022. PMID: 36206157 Free PMC article.
Tandem mass spectrometry (MS/MS) is widely employed for the analysis of complex proteomic samples. While protein sequence database searching and spectral library searching are both well-established peptide identification methods, each has shortcomings. ...Her …
Tandem mass spectrometry (MS/MS) is widely employed for the analysis of complex proteomic samples. While protein sequence database …
A new search tool for familial searches in the Israel Criminal DNA database.
Ram T, Starinsky-Elbaz S, Avlas O, Issan Y. Ram T, et al. Forensic Sci Int. 2023 May;346:111639. doi: 10.1016/j.forsciint.2023.111639. Epub 2023 Mar 7. Forensic Sci Int. 2023. PMID: 36966587
The Israel DNA database has recently started to conduct familial searches (FS). We adopted the CODIS pedigree strategy for FS, which is used in the Unidentified Human Remains (UHR) database and implemented it into the criminal forensic database. This s …
The Israel DNA database has recently started to conduct familial searches (FS). We adopted the CODIS pedigree strategy for FS, …
292,577 results
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