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Fitness effects of fixed beneficial mutations in microbial populations.
Rozen DE, de Visser JA, Gerrish PJ. Rozen DE, et al. Curr Biol. 2002 Jun 25;12(12):1040-5. doi: 10.1016/s0960-9822(02)00896-5. Curr Biol. 2002. PMID: 12123580
Environmental stress and the effects of mutation.
Elena SF, de Visser JA. Elena SF, et al. J Biol. 2003;2(2):12. doi: 10.1186/1475-4924-2-12. Epub 2003 Jun 26. J Biol. 2003. PMID: 12831400 Free PMC article. Review.
Patterns of Epistasis between beneficial mutations in an antibiotic resistance gene.
Schenk MF, Szendro IG, Salverda ML, Krug J, de Visser JA. Schenk MF, et al. Mol Biol Evol. 2013 Aug;30(8):1779-87. doi: 10.1093/molbev/mst096. Epub 2013 May 15. Mol Biol Evol. 2013. PMID: 23676768 Free PMC article.
Predicting the evolution of antibiotic resistance.
Schenk MF, de Visser JA. Schenk MF, et al. BMC Biol. 2013 Feb 22;11:14. doi: 10.1186/1741-7007-11-14. BMC Biol. 2013. PMID: 23433262 Free PMC article.
Mutation supply and the repeatability of selection for antibiotic resistance.
van Dijk T, Hwang S, Krug J, de Visser JAGM, Zwart MP. van Dijk T, et al. Phys Biol. 2017 Aug 21;14(5):055005. doi: 10.1088/1478-3975/aa7f36. Phys Biol. 2017. PMID: 28699625
Negative Epistasis and Evolvability in TEM-1 β-Lactamase--The Thin Line between an Enzyme's Conformational Freedom and Disorder.
Dellus-Gur E, Elias M, Caselli E, Prati F, Salverda ML, de Visser JA, Fraser JS, Tawfik DS. Dellus-Gur E, et al. Among authors: de visser ja. J Mol Biol. 2015 Jul 17;427(14):2396-409. doi: 10.1016/j.jmb.2015.05.011. Epub 2015 May 22. J Mol Biol. 2015. PMID: 26004540 Free PMC article.
Diminishing-returns epistasis among random beneficial mutations in a multicellular fungus.
Schoustra S, Hwang S, Krug J, de Visser JA. Schoustra S, et al. Among authors: de visser ja. Proc Biol Sci. 2016 Aug 31;283(1837):20161376. doi: 10.1098/rspb.2016.1376. Proc Biol Sci. 2016. PMID: 27559062 Free PMC article.
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