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Predictions of Cleavability of Calpain Proteolysis by Quantitative Structure-Activity Relationship Analysis Using Newly Determined Cleavage Sites and Catalytic Efficiencies of an Oligopeptide Array.
Shinkai-Ouchi F, Koyama S, Ono Y, Hata S, Ojima K, Shindo M, duVerle D, Ueno M, Kitamura F, Doi N, Takigawa I, Mamitsuka H, Sorimachi H. Shinkai-Ouchi F, et al. Among authors: duverle d. Mol Cell Proteomics. 2016 Apr;15(4):1262-80. doi: 10.1074/mcp.M115.053413. Epub 2016 Jan 21. Mol Cell Proteomics. 2016. PMID: 26796116 Free PMC article.
Discovering combinatorial interactions in survival data.
Duverle DA, Takeuchi I, Murakami-Tonami Y, Kadomatsu K, Tsuda K. Duverle DA, et al. Bioinformatics. 2013 Dec 1;29(23):3053-9. doi: 10.1093/bioinformatics/btt532. Epub 2013 Sep 13. Bioinformatics. 2013. PMID: 24037215 Free PMC article.
Comparative Analysis of Patient-Matched PDOs Revealed a Reduction in OLFM4-Associated Clusters in Metastatic Lesions in Colorectal Cancer.
Okamoto T, duVerle D, Yaginuma K, Natsume Y, Yamanaka H, Kusama D, Fukuda M, Yamamoto M, Perraudeau F, Srivastava U, Kashima Y, Suzuki A, Kuze Y, Takahashi Y, Ueno M, Sakai Y, Noda T, Tsuda K, Suzuki Y, Nagayama S, Yao R. Okamoto T, et al. Among authors: duverle d. Stem Cell Reports. 2021 Apr 13;16(4):954-967. doi: 10.1016/j.stemcr.2021.02.012. Epub 2021 Mar 11. Stem Cell Reports. 2021. PMID: 33711267