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1906 1
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1942 1
1943 1
1944 3
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1946 16
1947 14
1948 32
1949 18
1950 30
1951 46
1952 26
1953 37
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1955 38
1956 59
1957 55
1958 46
1959 59
1960 60
1961 65
1962 55
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1964 96
1965 59
1966 83
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1969 650
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1971 981
1972 1182
1973 1304
1974 1835
1975 1524
1976 1331
1977 1201
1978 1066
1979 1132
1980 1047
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1982 1221
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1984 1510
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1986 1640
1987 1857
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1993 3622
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2002 13651
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2008 26339
2009 28456
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2011 32448
2012 34619
2013 35153
2014 35968
2015 36248
2016 35286
2017 33938
2018 32346
2019 33132
2020 33146
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2022 26981
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2024 27280
2025 29545
2026 17898
2027 1

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723,637 results

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Page 1
Genotype Imputation in Genome-Wide Association Studies.
Naj AC. Naj AC. Curr Protoc Hum Genet. 2019 Jun;102(1):e84. doi: 10.1002/cphg.84. Curr Protoc Hum Genet. 2019. PMID: 31216114 Review.
Genotype imputation infers missing genotypes in silico using haplotype information from reference samples with genotypes from denser genotyping arrays or sequencing. ...For practical application, it provides a step-by-step guide to implementation of a …
Genotype imputation infers missing genotypes in silico using haplotype information from reference samples with genotypes …
GenoTriplo: A SNP genotype calling method for triploids.
Roche J, Besson M, Allal F, Haffray P, Patrice P, Vandeputte M, Phocas F. Roche J, et al. PLoS Comput Biol. 2024 Sep 24;20(9):e1012483. doi: 10.1371/journal.pcbi.1012483. eCollection 2024 Sep. PLoS Comput Biol. 2024. PMID: 39316624 Free PMC article.
We compared the performance of GenoTriplo with that of fitPoly, the only published method for triploid SNP genotyping with a free software access. This was assessed by comparing the genotypes generated by both methods for a dataset of 1232 triploid rainbow trout …
We compared the performance of GenoTriplo with that of fitPoly, the only published method for triploid SNP genotyping with a free sof …
New Genotype G3 P[8] of Rotavirus Identified in a Mexican Gastroenteric Rabbit.
Reynoso-Utrera E, Bautista-Gómez LG, Fonseca-Coronado S, Pérez-de la Rosa JD, Rodríguez-Villavicencio VJ, Romero-Núñez C, Flores-Ortega A, Hernández-García PA, Martínez-Castañeda JS. Reynoso-Utrera E, et al. Viruses. 2024 Nov 2;16(11):1729. doi: 10.3390/v16111729. Viruses. 2024. PMID: 39599844 Free PMC article.
The study of the genetic characteristics of RVAs that infect rabbits (Oryctolagus cuniculus) (lapine strain [LRV]) has been limited, and, to date, the most common and epidemiologically important combinations of G/P genotypes in rabbits have been reported to be G3 P[14] and …
The study of the genetic characteristics of RVAs that infect rabbits (Oryctolagus cuniculus) (lapine strain [LRV]) has been limited, and, to …
Genotyping Streptococcus pneumoniae.
Rayner RE, Savill J, Hafner LM, Huygens F. Rayner RE, et al. Future Microbiol. 2015;10(4):653-64. doi: 10.2217/fmb.14.153. Future Microbiol. 2015. PMID: 25865199 Review.
Unfortunately, no universal MLVA protocol exists, and some MLVA protocols do not amplify certain loci for all pneumococcal serotypes, leaving genotyping profiles incomplete. A number of other genotyping or characterization methods have been developed and will be dis …
Unfortunately, no universal MLVA protocol exists, and some MLVA protocols do not amplify certain loci for all pneumococcal serotypes, leavin …
Occurrence of multiple genotype infection caused by Leishmania infantum in naturally infected dogs.
Cupolillo E, Cavalcanti AS, Ferreira GEM, Boité MC, Morgado FN, Porrozzi R. Cupolillo E, et al. PLoS Negl Trop Dis. 2020 Jul 27;14(7):e0007986. doi: 10.1371/journal.pntd.0007986. eCollection 2020 Jul. PLoS Negl Trop Dis. 2020. PMID: 32716941 Free PMC article.
The present study employed multilocus microsatellite typing (MLMT) to explore the genotypic composition of Leishmania infantum in naturally infected dogs by genotyping parasites infecting different tissues with or without in vitro expansion. ...Of the 86 samples, 23 …
The present study employed multilocus microsatellite typing (MLMT) to explore the genotypic composition of Leishmania infantum in nat …
Genotype imputation accuracy in multiple equine breeds from medium- to high-density genotypes.
Chassier M, Barrey E, Robert C, Duluard A, Danvy S, Ricard A. Chassier M, et al. J Anim Breed Genet. 2018 Oct;135(6):420-431. doi: 10.1111/jbg.12358. Epub 2018 Oct 9. J Anim Breed Genet. 2018. PMID: 30298946
Genotype imputation is now a key component of genomic analyses as it increases the density of available genotypes within a population. ...The aim of this study was to assess and compare the accuracy of imputation of high-density genotypes (Affymetrix Axiom Eq …
Genotype imputation is now a key component of genomic analyses as it increases the density of available genotypes within a pop …
Genotype Groups of the Wheat Leaf Rust Fungus Puccinia triticina in the United States as Determined by Genotyping by Sequencing.
Kolmer JA, Herman A, Fellers JP. Kolmer JA, et al. Phytopathology. 2022 Mar;112(3):653-662. doi: 10.1094/PHYTO-03-21-0125-R. Epub 2022 Feb 28. Phytopathology. 2022. PMID: 34261342
Populations of P. triticina are characterized by virulence phenotypes that change rapidly because of selection by wheat cultivars with leaf rust resistance genes. The objective of this study was to genotype collections of P. triticina from 2011 to 2018 in the United States …
Populations of P. triticina are characterized by virulence phenotypes that change rapidly because of selection by wheat cultivars with leaf …
CAPG: comprehensive allopolyploid genotyper.
Kulkarni R, Zhang Y, Cannon SB, Dorman KS. Kulkarni R, et al. Bioinformatics. 2023 Jan 1;39(1):btac729. doi: 10.1093/bioinformatics/btac729. Bioinformatics. 2023. PMID: 36367243 Free PMC article.
Recent polyploid genotyping methods use allelic frequencies, rate of heterozygosity, parental cross or other information to resolve read assignment, but good subgenomic references offer the most direct information. ...RESULTS: We introduce the Comprehensive Allopolyploid …
Recent polyploid genotyping methods use allelic frequencies, rate of heterozygosity, parental cross or other information to resolve r …
Genotype distribution in relation to viral load in a large cohort of Indian patients with chronic hepatitis C virus infection: A retrospective analysis.
Panyala BR, Mukherjee RM, Devarakonda H, Tadivaka S, Padaki NR, Sharma M, Duvvuru NR. Panyala BR, et al. Indian J Gastroenterol. 2019 Apr;38(2):110-116. doi: 10.1007/s12664-019-00934-x. Epub 2019 Mar 22. Indian J Gastroenterol. 2019. PMID: 30903612
RESULTS: Out of 862 patients, genotype 1 was detected predominantly in 392 (45.5%), followed by genotype 3 in 344 (39.9%) patients; genotypes 4, 6, and 2 were detected in 115 (13.3%), 8 (0.9%), and 3 (0.3%) patients, respectively. ...Patients having genoty …
RESULTS: Out of 862 patients, genotype 1 was detected predominantly in 392 (45.5%), followed by genotype 3 in 344 (39.9%) pati …
High density genotype storage for plant breeding in the Chado schema of Breedbase.
Morales N, Bauchet GJ, Tantikanjana T, Powell AF, Ellerbrock BJ, Tecle IY, Mueller LA. Morales N, et al. PLoS One. 2020 Nov 11;15(11):e0240059. doi: 10.1371/journal.pone.0240059. eCollection 2020. PLoS One. 2020. PMID: 33175872 Free PMC article.
The Breedbase genotyping data model can handle different ploidy levels, structural variants, and any genotype encoded in VCF. ...Integration of all breeding data within the Chado database schema retains referential integrity that may be lost when genotyping a …
The Breedbase genotyping data model can handle different ploidy levels, structural variants, and any genotype encoded in VCF. …
723,637 results
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