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2019 3
2020 8
2021 1
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Geographical and temporal distribution of SARS-CoV-2 clades in the WHO European Region, January to June 2020.
Alm E, Broberg EK, Connor T, Hodcroft EB, Komissarov AB, Maurer-Stroh S, Melidou A, Neher RA, O'Toole Á, Pereyaslov D; WHO European Region sequencing laboratories and GISAID EpiCoV group; WHO European Region sequencing laboratories and GISAID EpiCoV group*. Alm E, et al. Euro Surveill. 2020 Aug;25(32):2001410. doi: 10.2807/1560-7917.ES.2020.25.32.2001410. Euro Surveill. 2020. PMID: 32794443 Free PMC article.
STAT2 signaling restricts viral dissemination but drives severe pneumonia in SARS-CoV-2 infected hamsters.
Boudewijns R, Thibaut HJ, Kaptein SJF, Li R, Vergote V, Seldeslachts L, Van Weyenbergh J, De Keyzer C, Bervoets L, Sharma S, Liesenborghs L, Ma J, Jansen S, Van Looveren D, Vercruysse T, Wang X, Jochmans D, Martens E, Roose K, De Vlieger D, Schepens B, Van Buyten T, Jacobs S, Liu Y, Martí-Carreras J, Vanmechelen B, Wawina-Bokalanga T, Delang L, Rocha-Pereira J, Coelmont L, Chiu W, Leyssen P, Heylen E, Schols D, Wang L, Close L, Matthijnssens J, Van Ranst M, Compernolle V, Schramm G, Van Laere K, Saelens X, Callewaert N, Opdenakker G, Maes P, Weynand B, Cawthorne C, Vande Velde G, Wang Z, Neyts J, Dallmeier K. Boudewijns R, et al. Among authors: marti carreras j. Nat Commun. 2020 Nov 17;11(1):5838. doi: 10.1038/s41467-020-19684-y. Nat Commun. 2020. PMID: 33203860 Free PMC article.
Preparedness needs research: How fundamental science and international collaboration accelerated the response to COVID-19.
Kinsella CM, Santos PD, Postigo-Hidalgo I, Folgueiras-González A, Passchier TC, Szillat KP, Akello JO, Álvarez-Rodríguez B, Martí-Carreras J. Kinsella CM, et al. Among authors: marti carreras j. PLoS Pathog. 2020 Oct 9;16(10):e1008902. doi: 10.1371/journal.ppat.1008902. eCollection 2020 Oct. PLoS Pathog. 2020. PMID: 33035262 Free PMC article. Review.
Accounting for population structure reveals ambiguity in the Zaire Ebolavirus reservoir dynamics.
Vrancken B, Wawina-Bokalanga T, Vanmechelen B, Martí-Carreras J, Carroll MW, Nsio J, Kapetshi J, Makiala-Mandanda S, Muyembe-Tamfum JJ, Baele G, Vermeire K, Vergote V, Ahuka-Mundeke S, Maes P. Vrancken B, et al. Among authors: marti carreras j. PLoS Negl Trop Dis. 2020 Mar 4;14(3):e0008117. doi: 10.1371/journal.pntd.0008117. eCollection 2020 Mar. PLoS Negl Trop Dis. 2020. PMID: 32130210 Free PMC article.
A Phylodynamic Workflow to Rapidly Gain Insights into the Dispersal History and Dynamics of SARS-CoV-2 Lineages.
Dellicour S, Durkin K, Hong SL, Vanmechelen B, Martí-Carreras J, Gill MS, Meex C, Bontems S, André E, Gilbert M, Walker C, De Maio N, Faria NR, Hadfield J, Hayette MP, Bours V, Wawina-Bokalanga T, Artesi M, Baele G, Maes P. Dellicour S, et al. Among authors: marti carreras j. Mol Biol Evol. 2020 Nov 3:msaa284. doi: 10.1093/molbev/msaa284. Online ahead of print. Mol Biol Evol. 2020. PMID: 33316043 Free PMC article.
NCBI's Virus Discovery Hackathon: Engaging Research Communities to Identify Cloud Infrastructure Requirements.
Connor R, Brister R, Buchmann JP, Deboutte W, Edwards R, Martí-Carreras J, Tisza M, Zalunin V, Andrade-Martínez J, Cantu A, D'Amour M, Efremov A, Fleischmann L, Forero-Junco L, Garmaeva S, Giluso M, Glickman C, Henderson M, Kellman B, Kristensen D, Leubsdorf C, Levi K, Levi S, Pakala S, Peddu V, Ponsero A, Ribeiro E, Roy F, Rutter L, Saha S, Shakya M, Shean R, Miller M, Tully B, Turkington C, Youens-Clark K, Vanmechelen B, Busby B. Connor R, et al. Among authors: marti carreras j. Genes (Basel). 2019 Sep 16;10(9):714. doi: 10.3390/genes10090714. Genes (Basel). 2019. PMID: 31527408 Free PMC article.
NCBI's Virus Discovery Codeathon: Building "FIVE" -The Federated Index of Viral Experiments API Index.
Martí-Carreras J, Gener AR, Miller SD, Brito AF, Camacho CE, Connor R, Deboutte W, Glickman C, Kristensen DM, Meyer WK, Modha S, Norris AL, Saha S, Belford AK, Biederstedt E, Brister JR, Buchmann JP, Cooley NP, Edwards RA, Javkar K, Muchow M, Muralidharan HS, Pepe-Ranney C, Shah N, Shakya M, Tisza MJ, Tully BJ, Vanmechelen B, Virta VC, Weissman JL, Zalunin V, Efremov A, Busby B. Martí-Carreras J, et al. Viruses. 2020 Dec 10;12(12):1424. doi: 10.3390/v12121424. Viruses. 2020. PMID: 33322070 Free PMC article.
Complete Genome Sequence of a New Ebola Virus Strain Isolated during the 2017 Likati Outbreak in the Democratic Republic of the Congo.
Wawina-Bokalanga T, Vanmechelen B, Martí-Carreras J, Vergote V, Vermeire K, Muyembe-Tamfum JJ, Ahuka-Mundeke S, Maes P. Wawina-Bokalanga T, et al. Among authors: marti carreras j. Microbiol Resour Announc. 2019 May 16;8(20):e00360-19. doi: 10.1128/MRA.00360-19. Microbiol Resour Announc. 2019. PMID: 31097506 Free PMC article.
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