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Table representation of search results timeline featuring number of search results per year.

Year Number of Results
2011 3
2012 4
2013 4
2014 2
2015 4
2016 1
2017 5
2018 2
2019 7
2020 4
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35 results
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Page 1
Understanding Tissue-Specific Gene Regulation.
Sonawane AR, Platig J, Fagny M, Chen CY, Paulson JN, Lopes-Ramos CM, DeMeo DL, Quackenbush J, Glass K, Kuijjer ML. Sonawane AR, et al. Among authors: kuijjer ml. Cell Rep. 2017 Oct 24;21(4):1077-1088. doi: 10.1016/j.celrep.2017.10.001. Cell Rep. 2017. PMID: 29069589 Free PMC article.
Cross-species genomic landscape comparison of human mucosal melanoma with canine oral and equine melanoma.
Wong K, van der Weyden L, Schott CR, Foote A, Constantino-Casas F, Smith S, Dobson JM, Murchison EP, Wu H, Yeh I, Fullen DR, Joseph N, Bastian BC, Patel RM, Martincorena I, Robles-Espinoza CD, Iyer V, Kuijjer ML, Arends MJ, Brenn T, Harms PW, Wood GA, Adams DJ. Wong K, et al. Among authors: kuijjer ml. Nat Commun. 2019 Jan 21;10(1):353. doi: 10.1038/s41467-018-08081-1. Nat Commun. 2019. PMID: 30664638 Free PMC article.
Machine learning analysis of gene expression data reveals novel diagnostic and prognostic biomarkers and identifies therapeutic targets for soft tissue sarcomas.
van IJzendoorn DGP, Szuhai K, Briaire-de Bruijn IH, Kostine M, Kuijjer ML, Bovée JVMG. van IJzendoorn DGP, et al. Among authors: kuijjer ml. PLoS Comput Biol. 2019 Feb 20;15(2):e1006826. doi: 10.1371/journal.pcbi.1006826. eCollection 2019 Feb. PLoS Comput Biol. 2019. PMID: 30785874 Free PMC article.
Gene Regulatory Network Analysis Identifies Sex-Linked Differences in Colon Cancer Drug Metabolism.
Lopes-Ramos CM, Kuijjer ML, Ogino S, Fuchs CS, DeMeo DL, Glass K, Quackenbush J. Lopes-Ramos CM, et al. Among authors: kuijjer ml. Cancer Res. 2018 Oct 1;78(19):5538-5547. doi: 10.1158/0008-5472.CAN-18-0454. Cancer Res. 2018. PMID: 30275053 Free PMC article.
Somatic mosaic IDH1 and IDH2 mutations are associated with enchondroma and spindle cell hemangioma in Ollier disease and Maffucci syndrome.
Pansuriya TC, van Eijk R, d'Adamo P, van Ruler MA, Kuijjer ML, Oosting J, Cleton-Jansen AM, van Oosterwijk JG, Verbeke SL, Meijer D, van Wezel T, Nord KH, Sangiorgi L, Toker B, Liegl-Atzwanger B, San-Julian M, Sciot R, Limaye N, Kindblom LG, Daugaard S, Godfraind C, Boon LM, Vikkula M, Kurek KC, Szuhai K, French PJ, Bovée JV. Pansuriya TC, et al. Among authors: kuijjer ml. Nat Genet. 2011 Nov 6;43(12):1256-61. doi: 10.1038/ng.1004. Nat Genet. 2011. PMID: 22057234 Free PMC article.
Cancer subtype identification using somatic mutation data.
Kuijjer ML, Paulson JN, Salzman P, Ding W, Quackenbush J. Kuijjer ML, et al. Br J Cancer. 2018 May;118(11):1492-1501. doi: 10.1038/s41416-018-0109-7. Epub 2018 May 16. Br J Cancer. 2018. PMID: 29765148 Free PMC article.
EndNote: Feature-based classification of networks.
Barnett I, Malik N, Kuijjer ML, Mucha PJ, Onnela JP. Barnett I, et al. Among authors: kuijjer ml. Netw Sci (Camb Univ Press). 2019 Sep;7(3):438-444. doi: 10.1017/nws.2019.21. Epub 2019 Sep 23. Netw Sci (Camb Univ Press). 2019. PMID: 31984135 Free PMC article.
Estimating Sample-Specific Regulatory Networks.
Kuijjer ML, Tung MG, Yuan G, Quackenbush J, Glass K. Kuijjer ML, et al. iScience. 2019 Apr 26;14:226-240. doi: 10.1016/j.isci.2019.03.021. Epub 2019 Mar 28. iScience. 2019. PMID: 30981959 Free PMC article.
lionessR: single sample network inference in R.
Kuijjer ML, Hsieh PH, Quackenbush J, Glass K. Kuijjer ML, et al. BMC Cancer. 2019 Oct 25;19(1):1003. doi: 10.1186/s12885-019-6235-7. BMC Cancer. 2019. PMID: 31653243 Free PMC article.
Exploring regulation in tissues with eQTL networks.
Fagny M, Paulson JN, Kuijjer ML, Sonawane AR, Chen CY, Lopes-Ramos CM, Glass K, Quackenbush J, Platig J. Fagny M, et al. Among authors: kuijjer ml. Proc Natl Acad Sci U S A. 2017 Sep 12;114(37):E7841-E7850. doi: 10.1073/pnas.1707375114. Epub 2017 Aug 29. Proc Natl Acad Sci U S A. 2017. PMID: 28851834 Free PMC article.
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