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Table representation of search results timeline featuring number of search results per year.

Year Number of Results
2011 1
2012 1
2013 5
2014 3
2015 9
2016 6
2017 7
2018 9
2019 8
2020 9
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53 results
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Page 1
MiXCR: software for comprehensive adaptive immunity profiling.
Bolotin DA, Poslavsky S, Mitrophanov I, Shugay M, Mamedov IZ, Putintseva EV, Chudakov DM. Bolotin DA, et al. Among authors: shugay m. Nat Methods. 2015 May;12(5):380-1. doi: 10.1038/nmeth.3364. Nat Methods. 2015. PMID: 25924071 No abstract available.
Antigen receptor repertoire profiling from RNA-seq data.
Bolotin DA, Poslavsky S, Davydov AN, Frenkel FE, Fanchi L, Zolotareva OI, Hemmers S, Putintseva EV, Obraztsova AS, Shugay M, Ataullakhanov RI, Rudensky AY, Schumacher TN, Chudakov DM. Bolotin DA, et al. Among authors: shugay m. Nat Biotechnol. 2017 Oct 11;35(10):908-911. doi: 10.1038/nbt.3979. Nat Biotechnol. 2017. PMID: 29020005 Free PMC article. No abstract available.
A mechanism for expansion of regulatory T-cell repertoire and its role in self-tolerance.
Feng Y, van der Veeken J, Shugay M, Putintseva EV, Osmanbeyoglu HU, Dikiy S, Hoyos BE, Moltedo B, Hemmers S, Treuting P, Leslie CS, Chudakov DM, Rudensky AY. Feng Y, et al. Among authors: shugay m. Nature. 2015 Dec 3;528(7580):132-136. doi: 10.1038/nature16141. Epub 2015 Nov 25. Nature. 2015. PMID: 26605529 Free PMC article.
An overview of immunoinformatics approaches and databases linking T cell receptor repertoires to their antigen specificity.
Zvyagin IV, Tsvetkov VO, Chudakov DM, Shugay M. Zvyagin IV, et al. Among authors: shugay m. Immunogenetics. 2020 Feb;72(1-2):77-84. doi: 10.1007/s00251-019-01139-4. Epub 2019 Nov 18. Immunogenetics. 2020. PMID: 31741011 Review.
VDJdb: a curated database of T-cell receptor sequences with known antigen specificity.
Shugay M, Bagaev DV, Zvyagin IV, Vroomans RM, Crawford JC, Dolton G, Komech EA, Sycheva AL, Koneva AE, Egorov ES, Eliseev AV, Van Dyk E, Dash P, Attaf M, Rius C, Ladell K, McLaren JE, Matthews KK, Clemens EB, Douek DC, Luciani F, van Baarle D, Kedzierska K, Kesmir C, Thomas PG, Price DA, Sewell AK, Chudakov DM. Shugay M, et al. Nucleic Acids Res. 2018 Jan 4;46(D1):D419-D427. doi: 10.1093/nar/gkx760. Nucleic Acids Res. 2018. PMID: 28977646 Free PMC article.
High-quality full-length immunoglobulin profiling with unique molecular barcoding.
Turchaninova MA, Davydov A, Britanova OV, Shugay M, Bikos V, Egorov ES, Kirgizova VI, Merzlyak EM, Staroverov DB, Bolotin DA, Mamedov IZ, Izraelson M, Logacheva MD, Kladova O, Plevova K, Pospisilova S, Chudakov DM. Turchaninova MA, et al. Among authors: shugay m. Nat Protoc. 2016 Sep;11(9):1599-616. doi: 10.1038/nprot.2016.093. Epub 2016 Aug 4. Nat Protoc. 2016. PMID: 27490633
Comparative Analysis of B-Cell Receptor Repertoires Induced by Live Yellow Fever Vaccine in Young and Middle-Age Donors.
Davydov AN, Obraztsova AS, Lebedin MY, Turchaninova MA, Staroverov DB, Merzlyak EM, Sharonov GV, Kladova O, Shugay M, Britanova OV, Chudakov DM. Davydov AN, et al. Among authors: shugay m. Front Immunol. 2018 Oct 9;9:2309. doi: 10.3389/fimmu.2018.02309. eCollection 2018. Front Immunol. 2018. PMID: 30356675 Free PMC article.
Detecting T cell receptors involved in immune responses from single repertoire snapshots.
Pogorelyy MV, Minervina AA, Shugay M, Chudakov DM, Lebedev YB, Mora T, Walczak AM. Pogorelyy MV, et al. Among authors: shugay m. PLoS Biol. 2019 Jun 13;17(6):e3000314. doi: 10.1371/journal.pbio.3000314. eCollection 2019 Jun. PLoS Biol. 2019. PMID: 31194732 Free PMC article.
High-resolution repertoire analysis reveals a major bystander activation of Tfh and Tfr cells.
Ritvo PG, Saadawi A, Barennes P, Quiniou V, Chaara W, El Soufi K, Bonnet B, Six A, Shugay M, Mariotti-Ferrandiz E, Klatzmann D. Ritvo PG, et al. Among authors: shugay m. Proc Natl Acad Sci U S A. 2018 Sep 18;115(38):9604-9609. doi: 10.1073/pnas.1808594115. Epub 2018 Aug 29. Proc Natl Acad Sci U S A. 2018. PMID: 30158170 Free PMC article.
The Changing Landscape of Naive T Cell Receptor Repertoire With Human Aging.
Egorov ES, Kasatskaya SA, Zubov VN, Izraelson M, Nakonechnaya TO, Staroverov DB, Angius A, Cucca F, Mamedov IZ, Rosati E, Franke A, Shugay M, Pogorelyy MV, Chudakov DM, Britanova OV. Egorov ES, et al. Among authors: shugay m. Front Immunol. 2018 Jul 24;9:1618. doi: 10.3389/fimmu.2018.01618. eCollection 2018. Front Immunol. 2018. PMID: 30087674 Free PMC article.
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