van Bakel H - Search Results

1

Monitoring global messenger RNA changes in externally controlled microarray experiments.

van de Peppel J, Kemmeren P, van Bakel H, Radonjic M, van Leenen D, Holstege FC. van de Peppel J, et al. Among authors: van bakel h, van leenen d. EMBO Rep. 2003 Apr;4(4):387-93. doi: 10.1038/sj.embor.embor798. EMBO Rep. 2003. PMID: 12671682 Free PMC article.

2

In control: systematic assessment of microarray performance.

van Bakel H, Holstege FC. van Bakel H, et al. EMBO Rep. 2004 Oct;5(10):964-9. doi: 10.1038/sj.embor.7400253. EMBO Rep. 2004. PMID: 15459748 Free PMC article. Review.

3

Gene expression profiling and phenotype analyses of S. cerevisiae in response to changing copper reveals six genes with new roles in copper and iron metabolism.

van Bakel H, Strengman E, Wijmenga C, Holstege FC. van Bakel H, et al. Physiol Genomics. 2005 Aug 11;22(3):356-67. doi: 10.1152/physiolgenomics.00055.2005. Epub 2005 May 10. Physiol Genomics. 2005. PMID: 15886332 Free article.

4

Mediator expression profiling epistasis reveals a signal transduction pathway with antagonistic submodules and highly specific downstream targets.

van de Peppel J, Kettelarij N, van Bakel H, Kockelkorn TT, van Leenen D, Holstege FC. van de Peppel J, et al. Among authors: van bakel h, van leenen d. Mol Cell. 2005 Aug 19;19(4):511-22. doi: 10.1016/j.molcel.2005.06.033. Mol Cell. 2005. PMID: 16109375 Free article.

5

Improved genome-wide localization by ChIP-chip using double-round T7 RNA polymerase-based amplification.

van Bakel H, van Werven FJ, Radonjic M, Brok MO, van Leenen D, Holstege FC, Timmers HT. van Bakel H, et al. Among authors: van werven fj, van leenen d. Nucleic Acids Res. 2008 Mar;36(4):e21. doi: 10.1093/nar/gkm1144. Epub 2008 Jan 7. Nucleic Acids Res. 2008. PMID: 18180247 Free PMC article.

6

Large-scale genetic perturbations reveal regulatory networks and an abundance of gene-specific repressors.

Kemmeren P, Sameith K, van de Pasch LA, Benschop JJ, Lenstra TL, Margaritis T, O'Duibhir E, Apweiler E, van Wageningen S, Ko CW, van Heesch S, Kashani MM, Ampatziadis-Michailidis G, Brok MO, Brabers NA, Miles AJ, Bouwmeester D, van Hooff SR, van Bakel H, Sluiters E, Bakker LV, Snel B, Lijnzaad P, van Leenen D, Groot Koerkamp MJ, Holstege FC. Kemmeren P, et al. Among authors: van wageningen s, van heesch s, van bakel h, van de pasch la, van leenen d, van hooff sr. Cell. 2014 Apr 24;157(3):740-52. doi: 10.1016/j.cell.2014.02.054. Cell. 2014. PMID: 24766815 Free article.

7

Gene expression profiling of liver cells after copper overload in vivo and in vitro reveals new copper-regulated genes.

Muller P, van Bakel H, van de Sluis B, Holstege F, Wijmenga C, Klomp LW. Muller P, et al. Among authors: van bakel h, van de sluis b. J Biol Inorg Chem. 2007 May;12(4):495-507. doi: 10.1007/s00775-006-0201-y. Epub 2007 Jan 9. J Biol Inorg Chem. 2007. PMID: 17211630

8

Cooperative action of NC2 and Mot1p to regulate TATA-binding protein function across the genome.

van Werven FJ, van Bakel H, van Teeffelen HA, Altelaar AF, Koerkamp MG, Heck AJ, Holstege FC, Timmers HT. van Werven FJ, et al. Among authors: van bakel h, van teeffelen ha. Genes Dev. 2008 Sep 1;22(17):2359-69. doi: 10.1101/gad.1682308. Epub 2008 Aug 14. Genes Dev. 2008. PMID: 18703679 Free PMC article.

9

Global transcriptional responses of fission and budding yeast to changes in copper and iron levels: a comparative study.

Rustici G, van Bakel H, Lackner DH, Holstege FC, Wijmenga C, Bähler J, Brazma A. Rustici G, et al. Among authors: van bakel h. Genome Biol. 2007;8(5):R73. doi: 10.1186/gb-2007-8-5-r73. Genome Biol. 2007. PMID: 17477863 Free PMC article.

10

Neutrophil recruitment and barrier impairment in celiac disease: a genomic study.

Diosdado B, van Bakel H, Strengman E, Franke L, van Oort E, Mulder CJ, Wijmenga C, Wapenaar MC. Diosdado B, et al. Among authors: van oort e, van bakel h. Clin Gastroenterol Hepatol. 2007 May;5(5):574-81. doi: 10.1016/j.cgh.2006.11.014. Epub 2007 Mar 2. Clin Gastroenterol Hepatol. 2007. PMID: 17336591

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