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Identification and analysis of evolutionarily cohesive functional modules in protein networks.
Campillos M, von Mering C, Jensen LJ, Bork P. Campillos M, et al. Among authors: von mering c. Genome Res. 2006 Mar;16(3):374-82. doi: 10.1101/gr.4336406. Epub 2006 Jan 31. Genome Res. 2006. PMID: 16449501 Free PMC article.
Rapid Inference of Direct Interactions in Large-Scale Ecological Networks from Heterogeneous Microbial Sequencing Data.
Tackmann J, Matias Rodrigues JF, von Mering C. Tackmann J, et al. Among authors: von mering c. Cell Syst. 2019 Sep 25;9(3):286-296.e8. doi: 10.1016/j.cels.2019.08.002. Epub 2019 Sep 18. Cell Syst. 2019. PMID: 31542415
Comparative assessment of large-scale data sets of protein-protein interactions.
von Mering C, Krause R, Snel B, Cornell M, Oliver SG, Fields S, Bork P. von Mering C, et al. Nature. 2002 May 23;417(6887):399-403. doi: 10.1038/nature750. Epub 2002 May 8. Nature. 2002. PMID: 12000970
Comparative genome and proteome analysis of Anopheles gambiae and Drosophila melanogaster.
Zdobnov EM, von Mering C, Letunic I, Torrents D, Suyama M, Copley RR, Christophides GK, Thomasova D, Holt RA, Subramanian GM, Mueller HM, Dimopoulos G, Law JH, Wells MA, Birney E, Charlab R, Halpern AL, Kokoza E, Kraft CL, Lai Z, Lewis S, Louis C, Barillas-Mury C, Nusskern D, Rubin GM, Salzberg SL, Sutton GG, Topalis P, Wides R, Wincker P, Yandell M, Collins FH, Ribeiro J, Gelbart WM, Kafatos FC, Bork P. Zdobnov EM, et al. Among authors: von mering c. Science. 2002 Oct 4;298(5591):149-59. doi: 10.1126/science.1077061. Science. 2002. PMID: 12364792
Immunity-related genes and gene families in Anopheles gambiae.
Christophides GK, Zdobnov E, Barillas-Mury C, Birney E, Blandin S, Blass C, Brey PT, Collins FH, Danielli A, Dimopoulos G, Hetru C, Hoa NT, Hoffmann JA, Kanzok SM, Letunic I, Levashina EA, Loukeris TG, Lycett G, Meister S, Michel K, Moita LF, Müller HM, Osta MA, Paskewitz SM, Reichhart JM, Rzhetsky A, Troxler L, Vernick KD, Vlachou D, Volz J, von Mering C, Xu J, Zheng L, Bork P, Kafatos FC. Christophides GK, et al. Among authors: von mering c. Science. 2002 Oct 4;298(5591):159-65. doi: 10.1126/science.1077136. Science. 2002. PMID: 12364793
STRING: a database of predicted functional associations between proteins.
von Mering C, Huynen M, Jaeggi D, Schmidt S, Bork P, Snel B. von Mering C, et al. Nucleic Acids Res. 2003 Jan 1;31(1):258-61. doi: 10.1093/nar/gkg034. Nucleic Acids Res. 2003. PMID: 12519996 Free PMC article.
Function prediction and protein networks.
Huynen MA, Snel B, von Mering C, Bork P. Huynen MA, et al. Among authors: von mering c. Curr Opin Cell Biol. 2003 Apr;15(2):191-8. doi: 10.1016/s0955-0674(03)00009-7. Curr Opin Cell Biol. 2003. PMID: 12648675 Review.
Genome evolution reveals biochemical networks and functional modules.
von Mering C, Zdobnov EM, Tsoka S, Ciccarelli FD, Pereira-Leal JB, Ouzounis CA, Bork P. von Mering C, et al. Proc Natl Acad Sci U S A. 2003 Dec 23;100(26):15428-33. doi: 10.1073/pnas.2136809100. Epub 2003 Dec 12. Proc Natl Acad Sci U S A. 2003. PMID: 14673105 Free PMC article.
Global analysis of bacterial transcription factors to predict cellular target processes.
Doerks T, Andrade MA, Lathe W 3rd, von Mering C, Bork P. Doerks T, et al. Among authors: von mering c. Trends Genet. 2004 Mar;20(3):126-31. doi: 10.1016/j.tig.2004.01.006. Trends Genet. 2004. PMID: 15049306 Review.
Protein interaction networks from yeast to human.
Bork P, Jensen LJ, von Mering C, Ramani AK, Lee I, Marcotte EM. Bork P, et al. Among authors: von mering c. Curr Opin Struct Biol. 2004 Jun;14(3):292-9. doi: 10.1016/ Curr Opin Struct Biol. 2004. PMID: 15193308 Review.
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