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16 results

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Page 1
A transcriptional atlas of gut-innervating neurons reveals activation of interferon signaling and ferroptosis during intestinal inflammation.
Forster PM, Jakob MO, Yusuf D, Bubeck M, Limberger H, Luo Y, Thieme P, Polici A, Sterczyk N, Boulekou S, Bartel L, Cosovanu C, Witkowski M, González-Acera M, Kühl AA, Weidinger C; TRR241 IBDome Consortium; Backofen R, Hegazy AN, Patankar JV, Klose CSN. Forster PM, et al. Among authors: yusuf d. Neuron. 2025 May 7;113(9):1333-1351.e7. doi: 10.1016/j.neuron.2025.02.018. Epub 2025 Mar 17. Neuron. 2025. PMID: 40101721 Free article.
Strategies for analyzing bisulfite sequencing data.
Wreczycka K, Gosdschan A, Yusuf D, Grüning B, Assenov Y, Akalin A. Wreczycka K, et al. Among authors: yusuf d. J Biotechnol. 2017 Nov 10;261:105-115. doi: 10.1016/j.jbiotec.2017.08.007. Epub 2017 Aug 16. J Biotechnol. 2017. PMID: 28822795 Free article. Review.
Deciphering human ribonucleoprotein regulatory networks.
Mukherjee N, Wessels HH, Lebedeva S, Sajek M, Ghanbari M, Garzia A, Munteanu A, Yusuf D, Farazi T, Hoell JI, Akat KM, Akalin A, Tuschl T, Ohler U. Mukherjee N, et al. Among authors: yusuf d. Nucleic Acids Res. 2019 Jan 25;47(2):570-581. doi: 10.1093/nar/gky1185. Nucleic Acids Res. 2019. PMID: 30517751 Free PMC article.
Community-Driven Data Analysis Training for Biology.
Batut B, Hiltemann S, Bagnacani A, Baker D, Bhardwaj V, Blank C, Bretaudeau A, Brillet-Guéguen L, Čech M, Chilton J, Clements D, Doppelt-Azeroual O, Erxleben A, Freeberg MA, Gladman S, Hoogstrate Y, Hotz HR, Houwaart T, Jagtap P, Larivière D, Le Corguillé G, Manke T, Mareuil F, Ramírez F, Ryan D, Sigloch FC, Soranzo N, Wolff J, Videm P, Wolfien M, Wubuli A, Yusuf D; Galaxy Training Network; Taylor J, Backofen R, Nekrutenko A, Grüning B. Batut B, et al. Among authors: yusuf d. Cell Syst. 2018 Jun 27;6(6):752-758.e1. doi: 10.1016/j.cels.2018.05.012. Cell Syst. 2018. PMID: 29953864 Free PMC article.
A SARS-CoV-2 sequence submission tool for the European Nucleotide Archive.
Roncoroni M, Droesbeke B, Eguinoa I, De Ruyck K, D'Anna F, Yusuf D, Grüning B, Backofen R, Coppens F. Roncoroni M, et al. Among authors: yusuf d. Bioinformatics. 2021 Nov 5;37(21):3983-3985. doi: 10.1093/bioinformatics/btab421. Bioinformatics. 2021. PMID: 34096994 Free PMC article.
Animal snoRNAs and scaRNAs with exceptional structures.
Marz M, Gruber AR, Höner Zu Siederdissen C, Amman F, Badelt S, Bartschat S, Bernhart SH, Beyer W, Kehr S, Lorenz R, Tanzer A, Yusuf D, Tafer H, Hofacker IL, Stadler PF. Marz M, et al. Among authors: yusuf d. RNA Biol. 2011 Nov-Dec;8(6):938-46. doi: 10.4161/rna.8.6.16603. Epub 2011 Nov 1. RNA Biol. 2011. PMID: 21955586 Free PMC article.
The extracellular RNA complement of Escherichia coli.
Ghosal A, Upadhyaya BB, Fritz JV, Heintz-Buschart A, Desai MS, Yusuf D, Huang D, Baumuratov A, Wang K, Galas D, Wilmes P. Ghosal A, et al. Among authors: yusuf d. Microbiologyopen. 2015 Apr;4(2):252-266. doi: 10.1002/mbo3.235. Epub 2015 Jan 21. Microbiologyopen. 2015. PMID: 25611733 Free PMC article.
16 results