That zincing feeling: the effects of EDTA on the behaviour of zinc-binding transcriptional regulators

Biochem J. 2004 Aug 1;381(Pt 3):e3-4. doi: 10.1042/BJ20041096.

Abstract

Zinc-binding proteins account for nearly half of the transcription regulatory proteins in the human genome and are the most abundant class of proteins in the human proteome. The zinc-binding transcriptional regulatory proteins utilize Zn2+ to fold structural domains that participate in intermolecular interactions. A study by Matt et al. in this issue of the Biochemical Journal has examined the transcription factor binding properties of the zinc-binding module C/H1 (cysteine/histidine-rich region 1) found in the transcriptional co-activator proteins CBP (CREB-binding protein) and p300. Their studies revealed that EDTA treatment of native C/H1 leads to irreversible denaturation and aggregation. Of particular concern is their finding that unfolded C/H1 participates in non-specific protein-protein interactions. The implications of these results are significant. EDTA is a very potent zinc-chelating agent that is used ubiquitously in protein interaction studies and in molecular biology in general. The potentially detrimental effects of EDTA on the structure and interactions of zinc-binding proteins should be taken into account in the interpretation of a sizeable number of published studies and must be considered in future experiments.

Publication types

  • Comment
  • Review

MeSH terms

  • Animals
  • Edetic Acid / pharmacology*
  • Humans
  • Transcription Factors / metabolism*
  • Transcription, Genetic / drug effects
  • Zinc / metabolism*
  • Zinc Fingers / drug effects
  • Zinc Fingers / physiology

Substances

  • Transcription Factors
  • Edetic Acid
  • Zinc