Polarizable Force Fields for Biomolecular Simulations: Recent Advances and Applications

Annu Rev Biophys. 2019 May 6:48:371-394. doi: 10.1146/annurev-biophys-070317-033349. Epub 2019 Mar 27.

Abstract

Realistic modeling of biomolecular systems requires an accurate treatment of electrostatics, including electronic polarization. Due to recent advances in physical models, simulation algorithms, and computing hardware, biomolecular simulations with advanced force fields at biologically relevant timescales are becoming increasingly promising. These advancements have not only led to new biophysical insights but also afforded opportunities to advance our understanding of fundamental intermolecular forces. This article describes the recent advances and applications, as well as future directions, of polarizable force fields in biomolecular simulations.

Keywords: QM/MM; molecular dynamics simulation; nucleic acid; polarizable force field; protein.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't
  • Review

MeSH terms

  • Algorithms
  • Molecular Dynamics Simulation*
  • Physical Phenomena
  • Static Electricity*