Sequence and functional analysis of the left-hand part of the T-region from the nopaline-type Ti plasmid, pTiC58

Plant Mol Biol. 1999 Dec;41(6):765-76. doi: 10.1023/a:1006370207379.

Abstract

The Agrobacterium tumefaciens nopaline strain C58 transfers a large, 29 kb T-DNA into plant cells during infection. Part of this DNA (the 'common DNA') is also found on the T-DNA of octopine strains, the remaining DNA is nopaline strain-specific. Up to now, only parts of the C58 T-DNA and related T37 T-DNA have been sequenced. We have sequenced the remainder of the nopaline-specific T-DNA (containing genes a to d) and acs to iaaM. Gene c codes for a new unknown T-DNA protein. Gene a is homologous to the agrocinopine synthase gene. Genes b, c', d and e are part of a larger family: they are related to the T-DNA genes 5, rolB, lso and 3'. Genes 5, rolB and lso induce or modify plant growth and have been called T-DNA oncogenes. Our studies show that gene 3' (located on the TR-DNA of octopine strains) is also oncogenic. Although the b-e T-DNA fragment from C58 and its individual genes lack growth-inducing activity, an a-acs deletion mutant was distinctly less virulent on Kalanchoe daigremontiana and showed reduced shoot formation on Kalanchoe tubiflora. Shoot formation could be restored by genes c and c' in co-infection experiments. Contrary to an earlier report, a C58 e gene deletion mutant was fully virulent on all plants tested.

Publication types

  • Comparative Study
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Agrobacterium tumefaciens / genetics*
  • Agrobacterium tumefaciens / pathogenicity
  • Chromosome Mapping
  • DNA, Bacterial / chemistry
  • DNA, Bacterial / genetics*
  • Gene Deletion
  • Genes, Bacterial / genetics
  • Genetic Complementation Test
  • Molecular Sequence Data
  • Mutation
  • Nicotiana / genetics
  • Nicotiana / microbiology
  • Phylogeny
  • Plant Tumors / genetics
  • Plant Tumors / microbiology
  • Plants, Medicinal / genetics
  • Plants, Medicinal / microbiology
  • Plants, Toxic
  • Plasmids / chemistry
  • Plasmids / genetics*
  • Sequence Analysis, DNA
  • Solanum lycopersicum / genetics
  • Solanum lycopersicum / microbiology
  • Species Specificity
  • Virulence / genetics

Substances

  • DNA, Bacterial
  • T-DNA

Associated data

  • GENBANK/AF126445
  • GENBANK/AF126446
  • GENBANK/AF126447