Binding citrate/DNA in presence of divalent cations. Potential mimicry of acidic peptides/DNA interactions

Mol Biol Rep. 2001 Mar;28(1):43-6. doi: 10.1023/a:1011903932645.

Abstract

Citric acid whose structure is comparable to that of small acidic peptides, can bind to DNA in the presence of divalent cations (Cu2+, Fe2+, Zn2+, Mg2+). Citrate-DNA interaction occurs also in a cell homogenate and in this experimental model too requires the presence of natural divalent cations. In fact the addition of 2 mM EDTA to cell homogenate strongly decreases the DNA-citrate binding. The results demonstrate that divalent cations can act as bridges between two acidic molecules and that citric acid can mimic the structure of acidic peptides.

MeSH terms

  • Animals
  • Base Pairing
  • Cations
  • Citric Acid / chemistry
  • Citric Acid / metabolism*
  • Copper / metabolism
  • DNA / metabolism*
  • Edetic Acid / chemistry
  • Iron / metabolism
  • Magnesium / metabolism
  • Male
  • Molecular Mimicry
  • Peptides / chemistry
  • Serine / chemistry
  • Zinc / metabolism

Substances

  • Cations
  • Peptides
  • Citric Acid
  • Serine
  • Copper
  • DNA
  • Edetic Acid
  • Iron
  • Magnesium
  • Zinc