Poly(ADP-ribose) polymerase in base excision repair: always engaged, but not essential for DNA damage processing

Acta Biochim Pol. 2003;50(1):169-79.

Abstract

Poly(ADP-ribose) polymerase (PARP-1) is an abundant nuclear protein with a high affinity for single- and double-strand DNA breaks. Its binding to strand breaks promotes catalysis of the covalent modification of nuclear proteins with poly(ADP-ribose) synthesised from NAD(+). PARP-1-knockout cells are extremely sensitive to alkylating agents, suggesting the involvement of PARP-1 in base excision repair; however, its role remains unclear. We investigated the dependence of base excision repair pathways on PARP-1 and NAD(+) using whole cell extracts derived from normal and PARP-1 deficient mouse cells and DNA substrates containing abasic sites. In normal extracts the rate of repair was highly dependent on NAD(+). We found that in the absence of NAD(+) repair was slowed down 4-6-fold after incision of the abasic site. We also established that in extracts from PARP-1 deficient mouse cells, repair of both regular and reduced abasic sites was increased with respect to normal extracts and was NAD(+)-independent, suggesting that in both short- and long-patch BER PARP-1 slows down, rather than stimulates, the repair reaction. Our data support the proposal that PARP-1 does not play a major role in catalysis of DNA damage processing via either base excision repair pathway.

MeSH terms

  • Animals
  • Base Sequence
  • Binding Sites
  • DNA Repair / genetics*
  • Embryo, Mammalian
  • Fibroblasts / enzymology
  • Fibroblasts / physiology
  • Humans
  • Mice
  • Mice, Knockout
  • Molecular Sequence Data
  • Oligodeoxyribonucleotides / metabolism
  • Patch-Clamp Techniques
  • Poly(ADP-ribose) Polymerases / deficiency
  • Poly(ADP-ribose) Polymerases / genetics*
  • Poly(ADP-ribose) Polymerases / metabolism
  • Restriction Mapping
  • Substrate Specificity

Substances

  • Oligodeoxyribonucleotides
  • Poly(ADP-ribose) Polymerases