Efficient stimulation of site-specific ribosome frameshifting by antisense oligonucleotides

RNA. 2004 Oct;10(10):1653-61. doi: 10.1261/rna.7810204.

Abstract

Evidence is presented that morpholino, 2'-O-methyl, phosphorothioate, and RNA antisense oligonucleotides can direct site-specific -1 translational frameshifting when annealed to mRNA downstream from sequences where the P- and A-site tRNAs are both capable of repairing with -1 frame codons. The efficiency of ribosomes shifting into the new frame can be as high as 40%, determined by the sequence of the frameshift site, as well as the location, sequence composition, and modification of the antisense oligonucleotide. These results demonstrate that a perfect duplex formed by complementary oligonucleotides is sufficient to induce high level -1 frameshifting. The implications for the mechanism of action of natural programmed translational frameshift stimulators are discussed.

Publication types

  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Animals
  • Base Sequence
  • Frameshifting, Ribosomal* / drug effects
  • In Vitro Techniques
  • Luciferases / genetics
  • Oligoribonucleotides, Antisense / chemistry
  • Oligoribonucleotides, Antisense / genetics*
  • Oligoribonucleotides, Antisense / pharmacology
  • Rabbits
  • Recombinant Proteins / genetics
  • Reticulocytes / drug effects
  • Reticulocytes / metabolism

Substances

  • Oligoribonucleotides, Antisense
  • Recombinant Proteins
  • Luciferases