Purification and characterization of an L-arabinose isomerase from an isolated strain of Geobacillus thermodenitrificans producing D-tagatose

J Biotechnol. 2005 Nov 4;120(2):162-73. doi: 10.1016/j.jbiotec.2005.06.004. Epub 2005 Aug 9.

Abstract

The araA gene, encoding l-arabinose isomerase (AI), from the thermophilic bacterium Geobacillus thermodenitrificans was cloned and expressed in Escherichia coli. Recombinant AI was isolated with a final purity of about 97% and a final specific activity of 2.10 U/mg. The molecular mass of the purified AI was estimated to be about 230 kDa to be a tetramer composed of identical subunits. The AI exhibited maximum activity at 70 degrees C and pH 8.5 in the presence of Mn2+. The enzyme was stable at temperatures below 60 degrees C and within the pH range 7.5-8.0. d-Galactose and l-arabinose as substrate were isomerized with high activities. Ribitol was the strongest competitive inhibitor of AI with a Ki of 5.5mM. The apparent Km and Vmax for L-arabinose were 142 mM and 86 U/mg, respectively, whereas those for d-galactose were 408 mM and 6.9 U/mg, respectively. The catalytic efficiency (kcat/Km) was 48 mM(-1)min(-1) for L-arabinose and 0.5mM(-1)min(-1) for D-galactose. Mn2+ was a competitive activator and increased the thermal stability of the AI. The D-tagatose yield produced by AI from d-galactose was 46% without the addition of Mn2+ and 48% with Mn2+ after 300 min at 65 degrees C.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Aldose-Ketose Isomerases / antagonists & inhibitors
  • Aldose-Ketose Isomerases / genetics
  • Aldose-Ketose Isomerases / isolation & purification*
  • Aldose-Ketose Isomerases / metabolism
  • Bacillaceae / enzymology*
  • Bacillaceae / genetics
  • Bacillaceae / metabolism
  • Base Sequence
  • Biotechnology
  • Cations / pharmacology
  • Cloning, Molecular
  • DNA, Bacterial / genetics
  • Enzyme Stability
  • Genes, Bacterial
  • Hexoses / biosynthesis*
  • Hydrogen-Ion Concentration
  • Kinetics
  • Manganese / pharmacology
  • Molecular Sequence Data
  • Recombinant Proteins / genetics
  • Recombinant Proteins / isolation & purification
  • Recombinant Proteins / metabolism
  • Substrate Specificity
  • Temperature

Substances

  • Cations
  • DNA, Bacterial
  • Hexoses
  • Recombinant Proteins
  • Manganese
  • Aldose-Ketose Isomerases
  • L-arabinose isomerase
  • tagatose

Associated data

  • GENBANK/AF160811