Identification of polypeptides expressed in response to vinyl chloride, ethene, and epoxyethane in Nocardioides sp. strain JS614 by using peptide mass fingerprinting

Appl Environ Microbiol. 2007 Jul;73(13):4368-72. doi: 10.1128/AEM.00086-07. Epub 2007 May 4.

Abstract

Enzymes expressed in response to vinyl chloride, ethene, and epoxyethane by Nocardioides sp. strain JS614 were identified by using a peptide mass fingerprinting (PMF) approach. PMF provided insight concerning vinyl chloride biodegradation in strain JS614 and extends the use of matrix-assisted laser desorption-ionization time of flight mass spectrometry as a tool to enhance characterization of biodegradation pathways.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Bacterial Proteins / biosynthesis*
  • Bacterial Proteins / genetics
  • Bacterial Proteins / isolation & purification
  • Base Sequence
  • Biodegradation, Environmental
  • Carcinogens, Environmental / metabolism
  • Carcinogens, Environmental / toxicity
  • DNA Primers / genetics
  • DNA, Bacterial / genetics
  • Enzymes / biosynthesis
  • Enzymes / genetics
  • Enzymes / isolation & purification
  • Epoxy Compounds / metabolism
  • Epoxy Compounds / toxicity*
  • Ethylenes / metabolism
  • Ethylenes / toxicity*
  • Genes, Bacterial
  • Molecular Sequence Data
  • Peptide Mapping
  • Propionibacteriaceae / drug effects*
  • Propionibacteriaceae / genetics
  • Propionibacteriaceae / metabolism*
  • Proteomics
  • Reverse Transcriptase Polymerase Chain Reaction
  • Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization
  • Vinyl Chloride / metabolism
  • Vinyl Chloride / toxicity*
  • Water Pollutants, Chemical / metabolism
  • Water Pollutants, Chemical / toxicity

Substances

  • Bacterial Proteins
  • Carcinogens, Environmental
  • DNA Primers
  • DNA, Bacterial
  • Enzymes
  • Epoxy Compounds
  • Ethylenes
  • Water Pollutants, Chemical
  • ethylene
  • Vinyl Chloride

Associated data

  • GENBANK/Q56839
  • RefSeq/ZP_00655558
  • RefSeq/ZP_00655559
  • RefSeq/ZP_00655566
  • RefSeq/ZP_00655570
  • RefSeq/ZP_00655575
  • RefSeq/ZP_00655584