A simple and highly successful C-terminal sequence analysis of proteins by mass spectrometry

Proteomics. 2008 Apr;8(8):1539-50. doi: 10.1002/pmic.200701044.

Abstract

A simple and efficient method for C-terminal sequencing of proteins has long been pursued because it would provide substantial information for identifying the covalent structure, including post-translational modifications. However, there are still significant impediments to both direct sequencing from C termini of proteins and specific isolation of C-terminal peptides from proteins. We describe here a highly successful, de novo C-terminal sequencing method of proteins by employing succinimidyloxycarbonylmethyl tris (2,4,6-trimethoxyphenyl) phosphonium bromide and mass spectrometry.

MeSH terms

  • Animals
  • Caseins / analysis*
  • Cattle
  • Chickens
  • Cytochromes c / analysis*
  • Horses
  • Indicators and Reagents
  • Muramidase / analysis*
  • Organophosphorus Compounds / metabolism
  • Ovalbumin / analysis*
  • Peptide Fragments / analysis*
  • Peptide Mapping
  • Protein Processing, Post-Translational
  • Recombinant Proteins / analysis
  • Spectrometry, Mass, Electrospray Ionization
  • Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization / methods*

Substances

  • Caseins
  • Indicators and Reagents
  • Organophosphorus Compounds
  • Peptide Fragments
  • Recombinant Proteins
  • tris(trimethoxyphenyl)phosphonium acetyl
  • Ovalbumin
  • Cytochromes c
  • Muramidase