Structure of cyclic nucleoside phosphonate ester prodrugs: an inquiry

J Org Chem. 2012 Jan 6;77(1):684-9. doi: 10.1021/jo201735f. Epub 2011 Nov 30.

Abstract

The configuration at phosphorus in cyclic (S)-HPMPC (1, cidofovir) and (S)-HPMPA (2) phenyl ester (5 and 6, respectively) diastereomers ((R(p))-5, (R(p))-6, (S(p))-6) was determined by X-ray crystallography and correlated to their (1)H and (31)P NMR spectra in solution. (R(p))-5 and (R(p))-6 have chair conformations with the nucleobase substituent equatorial and the P-OPh axial. Perhaps surprisingly, (S(p))-6 is (a, a) in the crystal and exists largely as an equilibrium of (a, a)/(e, e) conformers in chloroform or acetonitrile.

Publication types

  • Research Support, N.I.H., Extramural

MeSH terms

  • Acetonitriles / chemistry
  • Chloroform / chemistry
  • Cidofovir
  • Crystallography, X-Ray
  • Cytosine / analogs & derivatives*
  • Cytosine / chemistry
  • Esters
  • Magnetic Resonance Spectroscopy
  • Molecular Conformation
  • Molecular Structure
  • Nucleosides / chemistry*
  • Organophosphonates / chemistry*
  • Prodrugs / chemistry*
  • Stereoisomerism

Substances

  • Acetonitriles
  • Esters
  • Nucleosides
  • Organophosphonates
  • Prodrugs
  • Chloroform
  • Cytosine
  • Cidofovir
  • acetonitrile