Probing the effects of residues located outside the agonist binding site on drug-receptor selectivity in the nicotinic receptor

ACS Chem Biol. 2012 May 18;7(5):841-6. doi: 10.1021/cb200448j. Epub 2012 Feb 14.

Abstract

The nicotinic acetylcholine receptors (nAChRs) are a family of closely related but pharmacologically distinct neurotransmitter-gated ion channels. They are therapeutic targets for a wide range of neurological disorders, and a key issue in drug development is selective targeting among the more than 20 subtypes of nAChRs that are known. The present work evaluates a proposed hydrogen bonding interaction involving a residue known as the "loop B glycine" that distinguishes receptors that are highly responsive to ACh and nicotine from those that are much less so. We have performed structure-function studies on the loop B site, including unnatural amino acid mutagenesis, in three different nAChR subtypes and found that the correlation between agonist potency and this residue is strong. Low potency receptor subtypes have a glycine at this key site, and mutation to a residue with a side chain converts a low potency receptor to a high potency receptor. Innately high potency receptors have a lysine at the loop B site and show a decrease in potency for the reverse mutation (i.e., introducing a glycine). This residue lies outside of the agonist binding site, and studies of other residues at the agonist binding site show that the details of how changes at the loop B glycine site impact agonist potency vary for differing receptor subtypes. This suggests a model in which the loop B residue influences the global shape of the agonist binding site rather than modulating any specific interaction.

Publication types

  • Research Support, N.I.H., Extramural

MeSH terms

  • Amino Acid Sequence
  • Animals
  • Binding Sites
  • Glycine / chemistry
  • Hydrogen Bonding
  • Lymnaea / chemistry*
  • Lymnaea / metabolism
  • Models, Molecular
  • Molecular Sequence Data
  • Nicotinic Agonists / chemistry*
  • Nicotinic Agonists / pharmacology*
  • Receptors, Nicotinic / chemistry*
  • Receptors, Nicotinic / metabolism*
  • Sequence Alignment

Substances

  • Nicotinic Agonists
  • Receptors, Nicotinic
  • Glycine