Nasal cell DNA methylation, inflammation, lung function and wheezing in children with asthma

Epigenomics. 2012 Feb;4(1):91-100. doi: 10.2217/epi.11.106.

Abstract

Aims: DNA methylation is increasingly proposed as a mechanism for underlying asthma-related inflammation. However, epigenetic studies are constrained by uncertainties on whether samples that can be easily collected in human individuals can provide informative results.

Methods: Two nasal cell DNA samples were collected on different days by nasal brushings from 35 asthmatic children aged between 8 and 11 years old. We correlated DNA methylation of IL-6, iNOS, Alu and LINE-1 with fractional exhaled nitric oxide, forced expiratory volume in 1 s and wheezing.

Results: Fractional exhaled nitric oxide increased in association with lower promoter methylation of both IL-6 (+29.0%; p = 0.004) and iNOS (+41.0%; p = 0.002). Lower IL-6 methylation was nonsignificantly associated with wheezing during the week of the study (odds ratio = 2.3; p = 0.063).

Conclusion: Our findings support the use of nasal cell DNA for human epigenetic studies of asthma.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Alu Elements / genetics
  • Asthma / complications
  • Asthma / genetics*
  • Asthma / metabolism
  • Child
  • DNA Methylation*
  • Epigenesis, Genetic
  • Female
  • Humans
  • Inflammation / etiology
  • Inflammation / genetics*
  • Interleukin-6 / genetics
  • Interleukin-6 / metabolism
  • Long Interspersed Nucleotide Elements / genetics
  • Lung / physiopathology*
  • Male
  • Nasal Mucosa / cytology
  • Nasal Mucosa / metabolism*
  • Nitric Oxide / metabolism
  • Nitric Oxide Synthase Type II / genetics
  • Nitric Oxide Synthase Type II / metabolism
  • Promoter Regions, Genetic
  • Respiratory Sounds / etiology
  • Respiratory Sounds / genetics*

Substances

  • Interleukin-6
  • Nitric Oxide
  • Nitric Oxide Synthase Type II