MiR-383 is downregulated in medulloblastoma and targets peroxiredoxin 3 (PRDX3)

Brain Pathol. 2013 Jul;23(4):413-25. doi: 10.1111/bpa.12014. Epub 2013 Jan 9.

Abstract

Accumulating evidence suggests that microRNAs (miRNAs) are over- or under-expressed in tumors, and abnormalities in miRNA expression may contribute to carcinogenesis. MiR-383 was previously identified as one of the under-expressed miRNAs in medulloblastoma (MB) by miRNA expression profiling. Quantitative reverse transcription polymerase chain reaction (RT-PCR)-based miRNA assays showed an enrichment of miR-383 in normal brain. Based on these data, we speculated that miR-383 is important in MB pathogenesis. In this study, we demonstrated significant downregulation of miR-383 in 23/29 (79%) MB samples and 7/7 (100%) MB cells lines. Ectopic expression of miR-383 in MB cells led to suppression of cell growth, cell accumulation at sub-G1 phase and alteration of apoptosis-related proteins. By transcriptomic analysis and computational algorithms, we identified peroxiredoxin 3 (PRDX3) as a target gene of miR-383. Luciferase reporter assay confirmed that miR-383 negatively regulated PRDX3 by interaction between miR-383 and complementary sequences in the 3' UTR of PRDX3. MiR-383 repressed PRDX3 at transcriptional and translational levels as revealed by quantitative RT-PCR and Western blot analysis. Furthermore, depletion of PRDX3 by siRNAs resulted in similar effects as observed in miR-383-transfected cells. In conclusion, miR-383 acts as a regulator controlling cell growth of MB, at least in part, through targeting PRDX3.

MeSH terms

  • Adolescent
  • Adult
  • Apoptosis / drug effects
  • Apoptosis / genetics
  • Azacitidine / analogs & derivatives
  • Azacitidine / pharmacology
  • Cell Cycle / drug effects
  • Cell Cycle / genetics
  • Cell Line, Tumor
  • Cell Survival
  • Cerebellar Neoplasms / metabolism*
  • Child
  • Child, Preschool
  • Decitabine
  • Down-Regulation / genetics*
  • Enzyme Inhibitors / pharmacology
  • Female
  • Gene Expression Profiling
  • Gene Expression Regulation, Neoplastic / genetics
  • Humans
  • Hydroxamic Acids / pharmacology
  • Male
  • Medulloblastoma / metabolism*
  • Medulloblastoma / pathology
  • MicroRNAs / genetics
  • MicroRNAs / metabolism*
  • Peroxiredoxin III / metabolism*
  • RNA Interference / physiology
  • Young Adult

Substances

  • Enzyme Inhibitors
  • Hydroxamic Acids
  • MIRN383 microRNA, human
  • MicroRNAs
  • trichostatin A
  • Decitabine
  • PRDX3 protein, human
  • Peroxiredoxin III
  • Azacitidine