Rig-I regulates NF-κB activity through binding to Nf-κb1 3'-UTR mRNA

Proc Natl Acad Sci U S A. 2013 Apr 16;110(16):6459-64. doi: 10.1073/pnas.1304432110. Epub 2013 Apr 3.

Abstract

Retinoic acid inducible gene I (RIG-I) senses viral RNAs and triggers innate antiviral responses through induction of type I IFNs and inflammatory cytokines. However, whether RIG-I interacts with host cellular RNA remains undetermined. Here we report that Rig-I interacts with multiple cellular mRNAs, especially Nf-κb1. Rig-I is required for NF-κB activity via regulating Nf-κb1 expression at posttranscriptional levels. It interacts with the multiple binding sites within 3'-UTR of Nf-κb1 mRNA. Further analyses reveal that three distinct tandem motifs enriched in the 3'-UTR fragments can be recognized by Rig-I. The 3'-UTR binding with Rig-I plays a critical role in normal translation of Nf-κb1 by recruiting the ribosomal proteins [ribosomal protein L13 (Rpl13) and Rpl8] and rRNAs (18S and 28S). Down-regulation of Rig-I or Rpl13 significantly reduces Nf-κb1 and 3'-UTR-mediated luciferase expression levels. These findings indicate that Rig-I functions as a positive regulator for NF-κB signaling and is involved in multiple biological processes in addition to host antivirus immunity.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • 3' Untranslated Regions / genetics
  • Animals
  • Blotting, Northern
  • Blotting, Western
  • DEAD Box Protein 58
  • DEAD-box RNA Helicases / genetics
  • DEAD-box RNA Helicases / metabolism*
  • Fluorescent Antibody Technique
  • Gene Expression Regulation / physiology*
  • Immunoprecipitation
  • Luciferases
  • Mice
  • Mice, Knockout
  • Microarray Analysis
  • Molecular Dynamics Simulation
  • NF-kappa B / genetics
  • NF-kappa B / metabolism*
  • RNA Interference
  • RNA, Messenger / genetics
  • RNA, Messenger / metabolism*
  • Reverse Transcriptase Polymerase Chain Reaction
  • Ribosomal Proteins / metabolism

Substances

  • 3' Untranslated Regions
  • NF-kappa B
  • RNA, Messenger
  • Ribosomal Proteins
  • Rpl13a protein, mouse
  • ribosomal protein L8, rat
  • Luciferases
  • Ddx58 protein, mouse
  • DEAD Box Protein 58
  • DEAD-box RNA Helicases