Haplogroup heterogeneity of LHON patients carrying the m.14484T>C mutation in India

Invest Ophthalmol Vis Sci. 2013 Jun 10;54(6):3999-4005. doi: 10.1167/iovs.13-11925.

Abstract

Purpose: To investigate the clinical and mitochondrial DNA (mtDNA) haplogroup background of Indian Leber hereditary optic neuropathy (LHON) patients carrying the m.14484T>C mutation.

Methods: Detailed clinical investigation and complete mtDNA sequencing analysis was carried out for eight Indian LHON families with the m.14484T>C mutation. Haplogroup was constructed based on the evolutionarily important mtDNA variants.

Results: In the present study, we characterized eight unrelated probands selected from 187 LHON cases. The overall penetrance of the disease was estimated to be 19.75% (16/81) in eight pedigrees with the m.14484T>C mutation and showed substantially higher sex bias (male: female = 13:3). The mtDNA haplogrouping revealed that they belong to diverse haplogroups; i.e., F1c1, M31a, U2a, M*, I1, M6, M3a1, and R30a. Interestingly, we did not find an association of the m.14484T>C mutation with any specific haplogroup within the Indian population. We also did not find any secondary mutation(s) in these pedigrees, which might affect the clinical expression of LHON.

Conclusions: Contrary to earlier reports showing preferential association of the m.14484T>C mutation with western Eurasian haplogroup J and increased clinical penetrance when present in J1 subhaplogroup background, the present study shows that m.14484T>C arose independently in a different mtDNA haplogroup and ethnic background in India, which may influence the clinical expression of the disease.

Keywords: LHON; haplogroup; m.14484T>C; mtDNA; mutations.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adult
  • DNA, Mitochondrial / genetics*
  • Evolution, Molecular
  • Family Health
  • Female
  • Genetic Heterogeneity
  • Haplotypes
  • Humans
  • India
  • Male
  • NADH Dehydrogenase / genetics*
  • Optic Atrophy, Hereditary, Leber / ethnology
  • Optic Atrophy, Hereditary, Leber / genetics*
  • Optic Atrophy, Hereditary, Leber / pathology
  • Pedigree
  • Phylogeny
  • Point Mutation / genetics*
  • Young Adult

Substances

  • DNA, Mitochondrial
  • MT-ND6 protein, human
  • NADH Dehydrogenase