Biochemical characterization of the δ-carbonic anhydrase from the marine diatom Thalassiosira weissflogii, TweCA

J Enzyme Inhib Med Chem. 2014 Dec;29(6):906-11. doi: 10.3109/14756366.2013.868599. Epub 2014 Jan 24.

Abstract

Diatom genome sequences clearly reveal the presence of different systems for HCO3(-) uptake. Carbon-concentrating mechanisms (CCM) based on HCO3(-) transport and a plastid-localized carbonic anhydrase (CA, EC 4.2.1.1) appear to be more probable than the others because CAs have been identified in the genome of many diatoms. CAs are key enzymes involved in the acquisition of inorganic carbon for photosynthesis in phytoplankton, as they catalyze efficiently the interconversion between carbon dioxide and bicarbonate. Five genetically distinct classes of CAs exist, α-, β-, γ-, δ- and ζ and all of them are metalloenzymes. Recently we investigated for the first time the catalytic activity and inhibition of the δ-class CA from the marine diatom Thalassiosira weissflogii, named TweCA. This enzyme is an efficient catalyst for the CO2 hydration and its inhibition profile with sulfonamide/sulfamate and anions have also been investigated. Here, we report the detailed biochemical characterization and chemico-physical properties of the δ-CA of T. weissflogii. The δ-CA encoding gene was cloned and expressed in Artic Express cells and the recombinant protein purified to homogeneity. Interesting to note that TweCA has no intrinsic esterase activity with 4-nitrophenyl acetate (pNpA) as substrate although the phylogenetic analysis showed that δ-CAs are closer to the α-CAs than to the other classes of such enzymes.

Keywords: CO2 hydration; diatoms; esterase activity; metalloenzyme; phylogenetic analysis; δ-Carbonic anhydrase.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Bicarbonates / chemistry
  • Bicarbonates / metabolism
  • Carbon Dioxide / chemistry
  • Carbon Dioxide / metabolism
  • Carbonic Anhydrase Inhibitors / chemistry*
  • Carbonic Anhydrases / chemistry*
  • Carbonic Anhydrases / genetics
  • Diatoms / chemistry
  • Diatoms / classification
  • Diatoms / enzymology*
  • Diatoms / genetics
  • Enzyme Stability
  • Escherichia coli / genetics
  • Escherichia coli / metabolism
  • Gene Expression
  • Kinetics
  • Molecular Sequence Data
  • Phylogeny
  • Recombinant Proteins / chemistry*
  • Recombinant Proteins / genetics
  • Sequence Alignment
  • Sulfonamides / chemistry*

Substances

  • Bicarbonates
  • Carbonic Anhydrase Inhibitors
  • Recombinant Proteins
  • Sulfonamides
  • Carbon Dioxide
  • Carbonic Anhydrases