Analysis of the Rab GTPase Interactome in Dendritic Cells Reveals Anti-microbial Functions of the Rab32 Complex in Bacterial Containment

Immunity. 2016 Feb 16;44(2):422-37. doi: 10.1016/j.immuni.2016.01.027.

Abstract

Dendritic cells (DCs) orchestrate complex membrane trafficking through an interconnected transportation network linked together by Rab GTPases. Through a tandem affinity purification strategy and mass spectrometry, we depicted an interactomic landscape of major members of the mammalian Rab GTPase family. When complemented with imaging tools, this proteomic analysis provided a global view of intracellular membrane organization. Driven by this analysis, we investigated dynamic changes to the Rab32 subnetwork in DCs induced by L. monocytogenes infection and uncovered an essential role of this subnetwork in controlling the intracellular proliferation of L. monocytogenes. Mechanistically, Rab32 formed a persistent complex with two interacting proteins, PHB and PHB2, to encompass bacteria both during early phagosome formation and after L. monocytogenes escaped the original containment vacuole. Collectively, we have provided a functional compartmentalization overview and an organizational framework of intracellular Rab-mediated vesicle trafficking that can serve as a resource for future investigations.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Acyltransferases / metabolism
  • Animals
  • Anti-Infective Agents / therapeutic use
  • Cell Line
  • Computational Biology
  • Containment of Biohazards
  • Dendritic Cells / immunology*
  • Dendritic Cells / microbiology
  • Listeria monocytogenes / growth & development
  • Listeria monocytogenes / immunology*
  • Listeriosis / drug therapy
  • Listeriosis / immunology*
  • Mice
  • Multiprotein Complexes / metabolism*
  • Prohibitins
  • Protein Transport
  • Repressor Proteins / metabolism
  • Vacuoles / metabolism
  • rab GTP-Binding Proteins / metabolism*

Substances

  • Anti-Infective Agents
  • Multiprotein Complexes
  • Phb2 protein, mouse
  • Prohibitins
  • Repressor Proteins
  • Acyltransferases
  • poly-beta-hydroxybutyrate polymerase
  • Rab32 protein, mouse
  • rab GTP-Binding Proteins