Evaluating TNA stability under simulated physiological conditions

Bioorg Med Chem Lett. 2016 May 15;26(10):2418-2421. doi: 10.1016/j.bmcl.2016.03.118. Epub 2016 Apr 1.

Abstract

Chemically modified oligonucleotides are routinely used as diagnostic and therapeutic agents due to their enhanced biological stability relative to natural DNA and RNA. Here, we examine the biological stability of α-l-threofuranosyl nucleic acid (TNA), an artificial genetic polymer composed of repeating units of α-l-threofuranosyl sugars linked by 2',3'-phosphodiester bonds. We show that TNA remains undigested after 7days of incubation in the presence of either 50% human serum or human liver microsomes and is stable against snake venom phosphordiesterase (a highly active 3' exonuclease). We further show that TNA will protect internal DNA residues from nuclease digestion and shield complementary RNA strands from RNA degrading enzymes. Together, these results demonstrate that TNA is an RNA analogue with high biological stability.

Keywords: Biological stability; RNA analogue; Threose nucleic acid.

Publication types

  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Arabinonucleotides / pharmacokinetics
  • Drug Stability
  • Half-Life
  • Humans
  • Magnetic Resonance Spectroscopy
  • Microsomes, Liver / drug effects
  • Oligonucleotides / chemistry*
  • Oligonucleotides / pharmacokinetics
  • Phosphoric Diester Hydrolases / chemistry
  • Phosphoric Diester Hydrolases / metabolism
  • Ribose / chemistry
  • Tetroses / chemistry*

Substances

  • 2'-deoxy-2'-fluoro-beta-D-arabinonucleic acid
  • Arabinonucleotides
  • Oligonucleotides
  • Tetroses
  • Ribose
  • Phosphoric Diester Hydrolases
  • erythrose