Vps34 regulates Rab7 and late endocytic trafficking through recruitment of the GTPase-activating protein Armus

J Cell Sci. 2016 Dec 1;129(23):4424-4435. doi: 10.1242/jcs.192260. Epub 2016 Oct 28.

Abstract

The class III phosphoinositide 3-kinase (PI3K) Vps34 (also known as PIK3C3 in mammals) produces phosphatidylinositol 3-phosphate [PI(3)P] on both early and late endosome membranes to control membrane dynamics. We used Vps34-deficient cells to delineate whether Vps34 has additional roles in endocytic trafficking. In Vps34-/- mouse embryonic fibroblasts (MEFs), transferrin recycling and EEA1 membrane localization were unaffected despite elevated Rab5-GTP levels. Strikingly, a large increase in Rab7-GTP levels, an accumulation of enlarged late endosomes, and decreased EGFR degradation were observed in Vps34-deficient cells. The hyperactivation of Rab7 in Vps34-deficient cells stemmed from the failure to recruit the Rab7 GTPase-activating protein (GAP) Armus (also known as TBC1D2), which binds to PI(3)P, to late endosomes. Protein-lipid overlay and liposome-binding assays reveal that the putative pleckstrin homology (PH) domain in Armus can directly bind to PI(3)P. Elevated Rab7-GTP led to the failure of intraluminal vesicle (ILV) formation and lysosomal maturation. Rab7 silencing and Armus overexpression alleviated the vacuolization seen in Vps34-deficient cells. Taken together, these results demonstrate that Vps34 has a previously unknown role in regulating Rab7 activity and late endosomal trafficking.

Keywords: Armus; Endocytosis; Rab7; Vps34.

MeSH terms

  • Animals
  • Autophagy
  • Biocatalysis
  • Class III Phosphatidylinositol 3-Kinases / metabolism*
  • Endocytosis*
  • Endosomes / metabolism
  • Endosomes / ultrastructure
  • Fibroblasts / metabolism
  • GTPase-Activating Proteins / metabolism*
  • HeLa Cells
  • Humans
  • Lysosomes / metabolism
  • Lysosomes / ultrastructure
  • Mice, Knockout
  • Phosphatidylinositol Phosphates / metabolism
  • Protein Transport
  • TOR Serine-Threonine Kinases / metabolism
  • Vacuoles / metabolism
  • Vacuoles / ultrastructure
  • rab GTP-Binding Proteins / metabolism*
  • rab7 GTP-Binding Proteins

Substances

  • GTPase-Activating Proteins
  • Phosphatidylinositol Phosphates
  • TBC1D2 protein, mouse
  • phosphatidylinositol 3-phosphate
  • rab7 GTP-Binding Proteins
  • rab7 GTP-binding proteins, human
  • rab7 GTP-binding proteins, mouse
  • Class III Phosphatidylinositol 3-Kinases
  • TOR Serine-Threonine Kinases
  • rab GTP-Binding Proteins