Imaging Translational and Post-Translational Gene Regulatory Dynamics in Living Cells with Antibody-Based Probes

Trends Genet. 2017 May;33(5):322-335. doi: 10.1016/j.tig.2017.02.003. Epub 2017 Mar 27.

Abstract

Antibody derivatives, such as antibody fragments (Fabs) and single-chain variable fragments (scFvs), are now being used to image traditionally hard-to-see protein subpopulations, including nascent polypeptides being translated and post-translationally modified proteins. This has allowed researchers to directly image and quantify, for the first time, translation initiation and elongation kinetics with single-transcript resolution and the temporal ordering and kinetics of post-translational histone and RNA polymerase II modifications. Here, we review these developments and discuss the strengths and weaknesses of live-cell imaging with antibody-based probes. Further development of these probes will increase their versatility and open new avenues of research for dissecting complex gene regulatory dynamics.

Publication types

  • Review
  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Acetylation
  • Humans
  • Immunoglobulin Fragments / genetics*
  • Immunoglobulin Fragments / immunology
  • Kinetics
  • Peptides / genetics
  • Peptides / immunology
  • Peptides / isolation & purification*
  • Phosphorylation
  • Protein Biosynthesis / genetics
  • Single-Chain Antibodies / genetics*
  • Single-Chain Antibodies / immunology

Substances

  • Immunoglobulin Fragments
  • Peptides
  • Single-Chain Antibodies