Comprehensive Expression Profiling and Functional Network Analysis of Porphyra-334, One Mycosporine-Like Amino Acid (MAA), in Human Keratinocyte Exposed with UV-radiation

Mar Drugs. 2017 Jun 24;15(7):196. doi: 10.3390/md15070196.

Abstract

Mycosporine-like amino acids (MAAs) have been highlighted as pharmacologically active secondary compounds to protect cells from harmful UV-radiation by absorbing its energy. Previous studies have mostly focused on characterizing their physiological properties such as antioxidant activity and osmotic regulation. However, molecular mechanisms underlying their UV-protective capability have not yet been revealed. In the present study, we investigated the expression profiling of porphyra-334-modulated genes or microRNA (miRNAs) in response to UV-exposure and their functional networks, using cDNA and miRNAs microarray. Based on our data, we showed that porphyra-334-regulated genes play essential roles in UV-affected biological processes such as Wnt (Wingless/integrase-1) and Notch pathways which exhibit antagonistic relationship in various biological processes; the UV-repressed genes were in the Wnt signaling pathway, while the activated genes were in the Notch signaling. In addition, porphyra-334-regulated miRNAs can target many genes related with UV-mediated biological processes such as apoptosis, cell proliferation and translational elongation. Notably, we observed that functional roles of the target genes for up-regulated miRNAs are inversely correlated with those for down-regulated miRNAs; the former genes promote apoptosis and translational elongation, whereas the latter function as inhibitors in these processes. Taken together, these data suggest that porphyra-334 protects cells from harmful UV radiation through the comprehensive modulation of expression patterns of genes involved in UV-mediated biological processes, and that provide a new insight to understand its functional molecular networks.

Keywords: Mycosporine-like amino acids (MAAs); Notch pathway; UV-radiation; Wnt pathway; microRNAs; porphyra-334.

MeSH terms

  • Base Composition
  • Cell Line
  • Cyclohexanones*
  • Gene Expression Regulation / radiation effects*
  • Glycine / analogs & derivatives*
  • Humans
  • Keratinocytes / radiation effects*
  • MicroRNAs / genetics
  • MicroRNAs / metabolism
  • Oligonucleotide Array Sequence Analysis
  • Transcriptome*
  • Ultraviolet Rays*

Substances

  • Cyclohexanones
  • MicroRNAs
  • porphyra-334
  • Glycine