A Rare Lysozyme Crystal Form Solved Using Highly Redundant Multiple Electron Diffraction Datasets from Micron-Sized Crystals

Structure. 2018 Apr 3;26(4):667-675.e3. doi: 10.1016/j.str.2018.02.015. Epub 2018 Mar 15.

Abstract

Recent developments of novel electron diffraction techniques have shown to be powerful for determination of atomic resolution structures from micron- and nano-sized crystals, too small to be studied by single-crystal X-ray diffraction. In this work, the structure of a rare lysozyme polymorph is solved and refined using continuous rotation MicroED data and standard X-ray crystallographic software. Data collection was performed on a standard 200 kV transmission electron microscope (TEM) using a highly sensitive detector with a short readout time. The data collection is fast (∼3 min per crystal), allowing multiple datasets to be rapidly collected from a large number of crystals. We show that merging data from 33 crystals significantly improves not only the data completeness, overall I/σ and the data redundancy, but also the quality of the final atomic model. This is extremely useful for electron beam-sensitive crystals of low symmetry or with a preferred orientation on the TEM grid.

Keywords: MicroED; continuous rotation electron diffraction; cryo-EM; electron crystallography; electron diffraction; lysozyme; macromolecular structure; protein crystallography; protein structure; transmission electron microscopy.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Chickens
  • Crystallization
  • Crystallography / methods
  • Crystallography / statistics & numerical data*
  • Datasets as Topic
  • Egg White / chemistry
  • Image Processing, Computer-Assisted / statistics & numerical data*
  • Microscopy, Electron, Transmission / instrumentation
  • Microscopy, Electron, Transmission / methods
  • Microscopy, Electron, Transmission / statistics & numerical data*
  • Models, Molecular
  • Muramidase / chemistry*
  • Protein Conformation
  • Protein Folding
  • Software

Substances

  • Muramidase