iMetaLab 1.0: a web platform for metaproteomics data analysis

Bioinformatics. 2018 Nov 15;34(22):3954-3956. doi: 10.1093/bioinformatics/bty466.

Abstract

Summary: The human gut microbiota, a complex, dynamic and biodiverse community, has been increasingly shown to influence many aspects of health and disease. Metaproteomic analysis has proven to be a powerful approach to study the functionality of the microbiota. However, the processing and analyses of metaproteomic mass spectrometry data remains a daunting task in metaproteomics data analysis. We developed iMetaLab, a web based platform to provide a user-friendly and comprehensive data analysis pipeline with a focus on lowering the technical barrier for metaproteomics data analysis.

Availability and implementation: iMetaLab is freely available through at http://imetalab.ca.

Supplementary information: Supplementary data are available at Bioinformatics online.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Computational Biology
  • Data Analysis*
  • Gastrointestinal Microbiome*
  • Humans
  • Mass Spectrometry
  • Microbiota*
  • Software*