Flow Cytometry Analysis of Free Intracellular NAD+ Using a Targeted Biosensor

Curr Protoc Cytom. 2019 Apr;88(1):e54. doi: 10.1002/cpcy.54. Epub 2018 Dec 17.

Abstract

Flow cytometry approaches combined with a genetically encoded targeted fluorescent biosensor are used to determine the subcellular compartmental availability of the oxidized form of nicotinamide adenine dinucleotide (NAD+ ). The availability of free NAD+ can affect the activities of NAD+ -consuming enzymes such as sirtuin, PARP/ARTD, and cyclic ADPR-hydrolase family members. Many methods for measuring the NAD+ available to these enzymes are limited because they cannot determine free NAD+ as it exists in various subcellular compartments distinctly from bound NAD+ or NADH. Here, an approach to express the sensor in mammalian cells, monitor NAD+ -dependent fluorescence intensity changes using flow cytometry approaches, and analyze data obtained is described. The benefit of flow cytometry approaches with the NAD+ sensor is the ability to monitor compartmentalized free NAD+ fluctuations simultaneously within many cells, which greatly facilitates analyses and calibration. © 2018 by John Wiley & Sons, Inc.

Keywords: ARTD; CD-38; NAD+; PARP; circularly permutated fluorescent protein; fluorescent sensor; genetically encoded biosensor; metabolite; nicotinamide adenine dinucleotide; sirtuin.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Acrylamides / pharmacology
  • Biosensing Techniques / methods*
  • Calibration
  • Digitonin / pharmacology
  • Enzyme Inhibitors / pharmacology
  • Flow Cytometry / methods*
  • Fluorescence
  • HeLa Cells
  • Humans
  • Hydrogen-Ion Concentration
  • Intracellular Space / metabolism*
  • Mitochondria / drug effects
  • Mitochondria / metabolism
  • NAD / analysis*
  • Nicotinamide Phosphoribosyltransferase / antagonists & inhibitors
  • Nicotinamide Phosphoribosyltransferase / metabolism
  • Piperidines / pharmacology
  • Small Molecule Libraries / pharmacology
  • Statistics as Topic

Substances

  • Acrylamides
  • Enzyme Inhibitors
  • N-(4-(1-benzoylpiperidin-4-yl)butyl)-3-(pyridin-3-yl)acrylamide
  • Piperidines
  • Small Molecule Libraries
  • NAD
  • Nicotinamide Phosphoribosyltransferase
  • Digitonin