The Nuclear Pore Complex in Cell Type-Specific Chromatin Structure and Gene Regulation

Trends Genet. 2019 Aug;35(8):579-588. doi: 10.1016/j.tig.2019.05.006. Epub 2019 Jun 15.

Abstract

Nuclear pore complex (NPC)-mediated nucleocytoplasmic trafficking is essential for key cellular processes, such as cell growth, cell differentiation, and gene regulation. The NPC has also been viewed as a nuclear architectural platform that impacts genome function and gene expression by mediating spatial and temporal coordination between transcription factors, chromatin regulatory proteins, and transcription machinery. Recent findings have uncovered differential and cell type-specific expression and distinct chromatin-binding patterns of individual NPC components known as nucleoporins (Nups). Here, we examine recent studies that investigate the functional roles of NPCs and Nups in transcription, chromatin organization, and epigenetic gene regulation in the context of development and disease.

Keywords: chromatin organization; chromatin structure; epigenetic gene regulation; nuclear pore complex (NPC); nucleoporin (Nup); transcription.

Publication types

  • Research Support, Non-U.S. Gov't
  • Review

MeSH terms

  • Animals
  • Chromatin / genetics
  • Chromatin / metabolism*
  • Chromosome Structures / genetics
  • Chromosome Structures / metabolism
  • Drosophila / genetics
  • Epigenesis, Genetic
  • Gene Expression Regulation / genetics*
  • Genome / genetics*
  • Humans
  • Mice
  • Nuclear Pore / genetics
  • Nuclear Pore / metabolism*
  • Nuclear Pore Complex Proteins / genetics
  • Nuclear Pore Complex Proteins / metabolism*
  • Nucleic Acid Conformation
  • Transcription, Genetic
  • Yeasts / genetics

Substances

  • Chromatin
  • Nuclear Pore Complex Proteins