Neural correlates of sparse coding and dimensionality reduction

PLoS Comput Biol. 2019 Jun 27;15(6):e1006908. doi: 10.1371/journal.pcbi.1006908. eCollection 2019 Jun.

Abstract

Supported by recent computational studies, there is increasing evidence that a wide range of neuronal responses can be understood as an emergent property of nonnegative sparse coding (NSC), an efficient population coding scheme based on dimensionality reduction and sparsity constraints. We review evidence that NSC might be employed by sensory areas to efficiently encode external stimulus spaces, by some associative areas to conjunctively represent multiple behaviorally relevant variables, and possibly by the basal ganglia to coordinate movement. In addition, NSC might provide a useful theoretical framework under which to understand the often complex and nonintuitive response properties of neurons in other brain areas. Although NSC might not apply to all brain areas (for example, motor or executive function areas) the success of NSC-based models, especially in sensory areas, warrants further investigation for neural correlates in other regions.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, Non-P.H.S.
  • Review

MeSH terms

  • Animals
  • Brain / cytology
  • Brain / physiology
  • Computational Biology / methods*
  • Humans
  • Learning / physiology
  • Models, Neurological*
  • Models, Statistical*
  • Neurons / physiology*

Grants and funding

MB, ND, and JLK were supported by the National Science Foundation (Award IIS-1302125). In addition, MB was supported by the Washington Research Foundation Funds for Innovation in Neuroengineering and Data-Intensive Discovery. JLK was supported in part by the Defense Advanced Research Projects Agency (DARPA) via Air Force Research Laboratory (AFRL) Contract No. FA8750-18-C-0103 (Lifelong Learning Machines: L2M). Sandia National Laboratories is a multiprogram laboratory managed and operated by National Technology and Engineering Solutions of Sandia, LLC, for the U.S. Department of Energy's National Nuclear Security Administration under contract DE-NA0003525. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript. Any opinions, findings, and conclusions or recommendations expressed in this material are those of the authors and do not necessarily reflect the views of DARPA, AFRL, or the US Government.