Crosstalk between Lys63- and Lys11-polyubiquitin signaling at DNA damage sites is driven by Cezanne

Genes Dev. 2019 Dec 1;33(23-24):1702-1717. doi: 10.1101/gad.332395.119. Epub 2019 Nov 7.

Abstract

The establishment of polyubiquitin conjugates with distinct linkages play important roles in the DNA damage response. Much remains unknown about the regulation of linkage-specific ubiquitin signaling at sites of DNA damage. Here we reveal that Cezanne (also known as Otud7B) deubiquitinating enzyme promotes the recruitment of Rap80/BRCA1-A complex by binding to Lys63-polyubiquitin and targeting Lys11-polyubiquitin. Using a ubiquitin binding domain protein array screen, we identify that the UBA domains of Cezanne and Cezanne2 (also known as Otud7A) selectively bind to Lys63-linked polyubiquitin. Increased Lys11-linkage ubiquitination due to lack of Cezanne DUB activity compromises the recruitment of Rap80/BRCA1-A. Cezanne2 interacts with Cezanne, facilitating Cezanne in the recruitment of Rap80/BRCA1-A, Rad18, and 53BP1, in cellular resistance to ionizing radiation and DNA repair. Our work presents a model that Cezanne serves as a "reader" of the Lys63-linkage polyubiquitin at DNA damage sites and an "eraser" of the Lys11-linkage ubiquitination, indicating a crosstalk between linkage-specific ubiquitination at DNA damage sites.

Keywords: 53BP1; Abraxas; BRCA1; Cezanne; DNA damage response; DNA double-strand breaks; DUB; Lys11-linkage ubiquitin; Lys63-linkage ubiquitin; Rap80.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Cell Line, Tumor
  • DNA Damage* / radiation effects
  • DNA Repair / genetics*
  • DNA-Binding Proteins
  • Deubiquitinating Enzymes / genetics
  • Deubiquitinating Enzymes / metabolism
  • Endopeptidases / genetics*
  • Endopeptidases / metabolism*
  • Gene Knockdown Techniques
  • HEK293 Cells
  • Histone Chaperones
  • Humans
  • Lysine / metabolism
  • Nuclear Proteins
  • Polyubiquitin / metabolism*
  • Protein Array Analysis
  • Protein Binding
  • Protein Domains
  • Protein Transport / genetics
  • Radiation, Ionizing
  • Signal Transduction / physiology*

Substances

  • DNA-Binding Proteins
  • Histone Chaperones
  • Nuclear Proteins
  • UIMC1 protein, human
  • Polyubiquitin
  • Endopeptidases
  • OTUD7B protein, human
  • Deubiquitinating Enzymes
  • OTUD7A protein, human
  • Lysine