Suppressor tRNA-based Biosensors for Detecting Analytes

Anal Sci. 2021 Mar 10;37(3):407-414. doi: 10.2116/analsci.20SCR01. Epub 2020 Oct 2.

Abstract

A nonsense suppressor tRNA (sup-tRNA) allows a natural or non-natural amino acid to be assigned to a nonsense codon in mRNA. Sup-tRNAs were utilized initially for studying tRNA functions but lately are used more for protein engineering and gene regulation. In the latter application, a sup-tRNA that is aminoacylated with a natural amino acid by the corresponding aminoacyl-tRNA synthetase is used to express a full-length natural protein from its mutated gene with a nonsense codon in the middle. This type of sup-tRNA has recently been artificially evolved to develop biosensors. In these biosensors, an analyte induces the processing of an engineered premature sup-tRNA into a mature sup-tRNA, which suppresses the corresponding nonsense codon incorporated into a gene, encoding an easily detectable reporter protein. This review introduces sup-tRNA-based biosensors that the author's group has developed by utilizing bacterial and eukaryotic cell-free translation systems.

Keywords: Suppressor tRNA; amber suppression; biosensor; cell-free translation; gene regulation.

MeSH terms

  • Biosensing Techniques*
  • Proteins / analysis*
  • RNA, Transfer / chemistry*

Substances

  • Proteins
  • RNA, Transfer