Inhibitory effect of black cumin (Nigella sativa) seed essential oil on Fusobacterium nucleatum L-methionine-γ-lyase (L-methioninase) activity

FEMS Microbiol Lett. 2021 May 3;368(7):fnab041. doi: 10.1093/femsle/fnab041.

Abstract

The enzyme L-methionine-γ-lyase is commonly found in a wide range of bacteria and catalyzes the α-elimination and γ-elimination of L-methionine to produce methyl mercaptan, α-ketobutyrate and ammonia. Black cumin seed essential oil (BC oil) reportedly exhibits deodorizing activity against methyl mercaptan. Therefore, we hypothesized that BC oil may also suppress methyl mercaptan production. In this study, we aimed to evaluate the inhibitory effect of BC oil on L-methionine-γ-lyase activity in Fusobacterium nucleatum. Recombinant L-methionine-γ-lyase was incubated under appropriate conditions with BC oil and its constituent thymoquinone. To analyze L-methionine-γ-lyase activity, α-ketobutyric acid and ammonia concentrations were determined. The concentrations of α-ketobutyric acid and ammonia were significantly decreased by 10 µg mL-1 of BC oil (P < 0.01) and 16.4 µg/mL of thymoquinone (P < 0.05). An enzyme kinetic assay showed a mixed inhibition pattern between L-methionine-γ-lyase and thymoquinone. In conclusion, BC oil not only had a deodorizing effect against methyl mercaptan but also an inhibitory effect on methyl mercaptan production through the suppression of L-methionine-γ-lyase activity. Thymoquinone may be mainly responsible for these effects of BC oil. Thus, application of natural BC oil may be adapted not only for medical use but also in other areas of life.

Keywords: Fusobacterium nucleatum; L-methionine-γ-lyase; ammonia; black cumin; thymoquinone; α-ketobutyric acid.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Ammonia / metabolism
  • Anti-Bacterial Agents / pharmacology*
  • Benzoquinones / pharmacology
  • Butyrates / metabolism
  • Carbon-Sulfur Lyases / antagonists & inhibitors*
  • Carbon-Sulfur Lyases / metabolism
  • Fusobacterium nucleatum / drug effects*
  • Fusobacterium nucleatum / enzymology
  • Fusobacterium nucleatum / metabolism
  • Methionine / metabolism
  • Microbial Sensitivity Tests
  • Nigella sativa / chemistry*
  • Oils, Volatile / pharmacology*
  • Recombinant Proteins / metabolism
  • Seeds / chemistry

Substances

  • Anti-Bacterial Agents
  • Benzoquinones
  • Butyrates
  • Oils, Volatile
  • Recombinant Proteins
  • alpha-ketobutyric acid
  • Ammonia
  • Methionine
  • Carbon-Sulfur Lyases
  • L-methionine gamma-lyase
  • thymoquinone