Rapid Cryopurification of the Yeast Mitochondrial Ribosome

Methods Mol Biol. 2023:2661:133-141. doi: 10.1007/978-1-0716-3171-3_9.

Abstract

Cryogenic milling, or cryomilling, involves the use of liquid nitrogen to lower the temperature of the biological material and/or the milling process. When applied to the study of subcellular or suborganellar structures and processes, it allows for their rapid extraction from whole cells frozen in the physiological state of choice. This approach has proven to be useful for the study of yeast mitochondrial ribosomes. Following cryomilling of 100 mL of yeast culture, conveniently tagged mitochondrial ribosomes can be immunoprecipitated and purified in native conditions. These ribosomes are suitable for the application of downstream approaches. These include mitoribosome profiling to analyze the mitochondrial translatome or mass spectrometry analyses to assess the mitoribosome proteome in normal growth conditions or under stress, as described in this method.

Keywords: Cryomilling; Immunoblotting; Immunoprecipitation; Mass spectrometry; Yeast mitoribosome.

Publication types

  • Research Support, N.I.H., Extramural

MeSH terms

  • Mass Spectrometry
  • Mitochondria / ultrastructure
  • Mitochondrial Proteins / metabolism
  • Mitochondrial Ribosomes* / metabolism
  • Ribosomes / metabolism
  • Saccharomyces cerevisiae* / genetics

Substances

  • Mitochondrial Proteins