DprE2 is a molecular target of the anti-tubercular nitroimidazole compounds pretomanid and delamanid

Nat Commun. 2023 Jun 28;14(1):3828. doi: 10.1038/s41467-023-39300-z.

Abstract

Mycobacterium tuberculosis is one of the global leading causes of death due to a single infectious agent. Pretomanid and delamanid are new antitubercular agents that have progressed through the drug discovery pipeline. These compounds are bicyclic nitroimidazoles that act as pro-drugs, requiring activation by a mycobacterial enzyme; however, the precise mechanisms of action of the active metabolite(s) are unclear. Here, we identify a molecular target of activated pretomanid and delamanid: the DprE2 subunit of decaprenylphosphoribose-2'-epimerase, an enzyme required for the synthesis of cell wall arabinogalactan. We also provide evidence for an NAD-adduct as the active metabolite of pretomanid. Our results highlight DprE2 as a potential antimycobacterial target and provide a foundation for future exploration into the active metabolites and clinical development of pretomanid and delamanid.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Alcohol Oxidoreductases / antagonists & inhibitors
  • Antitubercular Agents* / pharmacology
  • Antitubercular Agents* / therapeutic use
  • Cell Wall / metabolism
  • Drug Resistance
  • Kinetics
  • Molecular Targeted Therapy
  • Mycobacterium tuberculosis* / drug effects
  • Mycobacterium tuberculosis* / enzymology
  • NAD / metabolism
  • Nitroimidazoles* / pharmacology
  • Nitroimidazoles* / therapeutic use
  • Prodrugs / chemistry
  • Prodrugs / metabolism
  • Spectrophotometry

Substances

  • Antitubercular Agents
  • pretomanid
  • OPC-67683
  • Alcohol Oxidoreductases
  • Nitroimidazoles
  • arabinogalactan
  • Prodrugs
  • NAD